RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TPBGLP0DKB5 382 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 ACADSP16219 412 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 RPS8P62241 208 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 Q4G0T1 1027 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 CCNJLQ8IV13 435 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 DNAJC9Q8WXX5 260 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 DDX12PQ92771 950 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 BHMG1C9JSJ3 638 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 KLRC1P26715 233 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 SERPINB4P48594 390 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 BPIFB4P59827 614 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 PPP4CP60510 307 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 FAM136AQ96C01 138 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 AIPL1Q9NZN9 384 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 F8VZ95 297 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 H0Y3Z8 333 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 GM2AP17900 193 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 MTMR3Q13615 1198 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 CUL1Q13616 776 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 CMPK2Q5EBM0 449 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 STK32AQ8WU08 396 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 INTS9Q9NV88 658 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 SCOCQ9UIL1 159 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 LNPEPQ9UIQ6 1025 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 BAG3O95817 575 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 DESP17661 470 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 C10orf76Q5T2E6 689 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 TMC3Q7Z5M5 1100 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 TRIM59Q8IWR1 403 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 USP15Q9Y4E8 981 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-205ENST00000483956 OAS1P00973 400 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 PENKP01210 267 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 USP46P62068 366 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 GSTO1P78417 241 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 DHX9Q08211 1270 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 KRT79Q5XKE5 535 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 FITM2Q8N6M3 262 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 IQCGQ9H095 443 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 NSRP1Q9H0G5 558 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 hCG_2014768A0A024R1R8 64 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 A0A087X0T9 212 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 SLC37A4O43826 429 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 MMP13P45452 471 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 NOVP48745 357 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 POLR2FP61218 127 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 COASYQ13057 564 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 MUM1Q2TAK8 710 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 IRGCQ6NXR0 463 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 MIGA2Q7L4E1 593 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 NEDD1Q8NHV4 660 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 RIOX1Q9H6W3 641 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
SEC61A1-205ENST00000483956 MYH4Q9Y623 1939 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 COL16A1Q07092 1604 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 MAFGO15525 162 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 DAPK3O43293 454 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 TPD52L2O43399 206 aaKnown RBP12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 SPATA31D3P0C874 917 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 MCL1Q07820 350 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 SPATA31D4Q6ZUB0 917 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 KCNK18Q7Z418 384 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 PIGSQ96S52 555 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 TMCO1Q9UM00 188 aa12.46□□□□□ -0.41
SEC61A1-205ENST00000483956 MTMR7Q9Y216 660 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms