RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 MIS18AQ9NYP9 233 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.68□□□□□ -1.66
LRCH3-217ENST00000483442 MARCH2Q9P0N8 246 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 AKT3Q9Y243 479 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 SUGT1Q9Y2Z0 365 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 EMC9Q9Y3B6 208 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 ABCC4O15439 1325 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 UBN2Q6ZU65 1347 aa4.68□□□□□ -1.66
LRCH3-217ENST00000483442 POLR2AP24928 1970 aaKnown RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 MKI67P46013 3256 aaKnown RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ECE2O60344 883 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 NPHS1O60500 1241 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 NTSR2O95665 410 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 THBDP07204 575 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 VIL1P09327 827 aaKnown RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 THBS2P35442 1172 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 NASPP49321 788 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 GJA9P57773 515 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 SLC10A5Q5PT55 438 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 KIF6Q6ZMV9 814 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 DDX46Q7L014 1031 aaKnown RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 MCM10Q7L590 875 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ZNF34Q8IZ26 560 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 FRS2Q8WU20 508 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ARMC5Q96C12 935 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 GPRASP2Q96D09 838 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ERO1AQ96HE7 468 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 PHACTR3Q96KR7 559 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 GPR20Q99678 358 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 C11orf84Q9BUA3 381 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 UTP14AQ9BVJ6 771 aaKnown RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 SSBP3Q9BWW4 388 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 NTMQ9P121 344 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 POLLQ9UGP5 575 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 TMEFF2Q9UIK5 374 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-217ENST00000483442 NUDT5Q9UKK9 219 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 KNSTRNQ9Y448 316 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 SLC12A7Q9Y666 1083 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ARFGEF2Q9Y6D5 1785 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 MAP3K15Q6ZN16 1313 aa4.67□□□□□ -1.66
LRCH3-217ENST00000483442 ANKRD26Q9UPS8 1709 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 SCAMP3O14828 347 aaKnown RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 TBX1O43435 398 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 CYP2C8P10632 490 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 NF2P35240 595 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 CASP7P55210 303 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 INHBEP58166 350 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 HDLBPQ00341 1268 aaKnown RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 SP3Q02447 781 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 GRAPQ13588 217 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 CNGB1Q14028 1251 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 DCTN1Q14203 1278 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 SLC9C1Q4G0N8 1177 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 VHLLQ6RSH7 139 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 ARMC9Q7Z3E5 817 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 CCDC103Q8IW40 242 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 GRAPLQ8TC17 118 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 RTF1Q92541 710 aaKnown RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 MRGPRX3Q96LB0 322 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 MMP19Q99542 508 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 FBXL7Q9UJT9 491 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 CNOT11Q9UKZ1 510 aaKnown RBP4.66□□□□□ -1.66
LRCH3-217ENST00000483442 FZD1Q9UP38 647 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 MYRFQ9Y2G1 1151 aa4.66□□□□□ -1.66
LRCH3-217ENST00000483442 RTL9Q8NET4 1388 aa4.65□□□□□ -1.66
LRCH3-217ENST00000483442 BCORQ6W2J9 1755 aa4.65□□□□□ -1.66
LRCH3-217ENST00000483442 TRIOBPQ9H2D6 2365 aa4.65□□□□□ -1.66
LRCH3-217ENST00000483442 SCN7AQ01118 1682 aa4.65□□□□□ -1.66
LRCH3-217ENST00000483442 ANKRD34BA5PLL1 514 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 MANSC4A6NHS7 340 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 C22orf46C9J442 243 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 MATN3O15232 486 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 TNFRSF1AP19438 455 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 FPR2P25090 351 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 GJA8P48165 433 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 RBM25P49756 843 aaKnown RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 GPSM2P81274 684 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 TAF7Q15545 349 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 PARP10Q53GL7 1025 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 MCTP2Q6DN12 878 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 GTF2IRD2BQ6EKJ0 949 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 CD300LDQ6UXZ3 194 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 GTF2IRD2Q86UP8 949 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 NLRP10Q86W26 655 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 DEFB123Q8N688 67 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 OR6P1Q8NGX9 317 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 NPLOC4Q8TAT6 608 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 ZNF333Q96JL9 665 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 EYA3Q99504 573 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 THUMPD2Q9BTF0 503 aaKnown RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 BCL11AQ9H165 835 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 MYOZ2Q9NPC6 264 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 SMPD4Q9NXE4 827 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 STAP2Q9UGK3 403 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 INVSQ9Y283 1065 aa4.65□□□□□ -1.67
LRCH3-217ENST00000483442 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-217ENST00000483442 PTCH2Q9Y6C5 1203 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms