RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RSPH10BP0C881 870 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 POLR2MP0CAP2 368 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 HOXD8P13378 290 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 EIF4BP23588 611 aaKnown RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 ERCC5P28715 1186 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 CCND2P30279 289 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 IRS1P35568 1242 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 THPOP40225 353 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 GHRHRQ02643 423 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 RAD51AP2Q09MP3 1159 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 TRDNQ13061 729 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 PTPROQ16827 1216 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 TRIM71Q2Q1W2 868 aaKnown RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 HSDL1Q3SXM5 330 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 GNPTABQ3T906 1256 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 SPRED2Q7Z698 418 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 VSIG10LQ86VR7 867 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 GALNT12Q8IXK2 581 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 SMC5Q8IY18 1101 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 DBF4BQ8NFT6 615 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 SEPT8Q92599 483 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 ATP6V0A1Q93050 837 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 RNF34Q969K3 372 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 SAMD11Q96NU1 681 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 LRFN3Q9BTN0 628 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 OSBPL7Q9BZF2 842 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 C12orf49Q9H741 205 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 UBE2ZQ9H832 354 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 PCDHGC4Q9Y5F7 938 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 LCTP09848 1927 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 EREGO14944 169 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 CAND2O75155 1236 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 STAM2O75886 525 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 GNAT1P11488 350 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 UBA1P22314 1058 aaKnown RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 KCNA5P22460 613 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 HOXA13P31271 388 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 ZNF200P98182 395 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 NUCB1Q02818 461 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 PTSQ03393 145 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 SFSWAPQ12872 951 aaKnown RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 NEDD9Q14511 834 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 MBTPS1Q14703 1052 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 PGM5Q15124 567 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 LEXMQ3ZCV2 418 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 TIGD5Q53EQ6 642 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 PLEKHG4Q58EX7 1191 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.77□□□□□ -1.336e-10■■■■□ 25.9
CSDE1-207ENST00000483407 SERINC5Q86VE9 423 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 FCHSD1Q86WN1 690 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 HOMER1Q86YM7 354 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 WNT8BQ93098 351 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 MRPL38Q96DV4 380 aaKnown RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 YME1L1Q96TA2 773 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 C17orf80Q9BSJ5 609 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 C16orf70Q9BSU1 422 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 GSX2Q9BZM3 304 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 NPHS2Q9NP85 383 aa6.77□□□□□ -1.33
CSDE1-207ENST00000483407 ZNF215Q9UL58 517 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 PRRC2BQ5JSZ5 2229 aaKnown RBP6.77□□□□□ -1.33
CSDE1-207ENST00000483407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 PI4K2BG5E9Z4 385 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 LGALS2P05162 132 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 SMIM10L2AP0DMW4 78 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 SMIM10L2BP0DMW5 78 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 ZNF76P36508 570 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 HTRA4P83105 476 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 SP2Q02086 613 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 TNP2Q05952 138 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 CCINQ13939 588 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 GRM4Q14833 912 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 SEC23AQ15436 765 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 TCTN1Q2MV58 587 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 EPC2Q52LR7 807 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 TTC39BQ5VTQ0 682 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 METTL7BQ6UX53 244 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 RALYLQ86SE5 291 aaKnown RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 NT5DC4Q86YG4 428 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 ZSCAN1Q8NBB4 408 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 IL31RAQ8NI17 732 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 APBB2Q92870 758 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 CUL5Q93034 780 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 SNX27Q96L92 541 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 PIGSQ96S52 555 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 NUCKS1Q9H1E3 243 aaKnown RBP6.76□□□□□ -1.33
CSDE1-207ENST00000483407 RIOX1Q9H6W3 641 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 NDFIP2Q9NV92 336 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 MAD2L2Q9UI95 211 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 FAM50BQ9Y247 325 aa6.76□□□□□ -1.33
CSDE1-207ENST00000483407 GBF1Q92538 1859 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 TANC1Q9C0D5 1861 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 H3BNC9 293 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 IFIT3O14879 490 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms