RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 LPPQ93052 612 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 TMX3Q96JJ7 454 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 UHRF1Q96T88 793 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-239ENST00000483086 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
HDLBP-239ENST00000483086 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-239ENST00000483086 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 COG5Q9UP83 839 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 COL4A3BPQ9Y5P4 624 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
HDLBP-239ENST00000483086 A0A0U1RQF3 1178 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 H3BQ06 376 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 MARCH6O60337 910 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 LYPLA2O95372 231 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 BAG4O95429 457 aaKnown RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 IL9P15248 144 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 KCNA5P22460 613 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 LAMTOR4Q0VGL1 99 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 RABEP1Q15276 862 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 UBXN11Q5T124 520 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 ASAP3Q8TDY4 903 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 POF1BQ8WVV4 589 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 P2RX5Q93086 422 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 TBC1D32Q96NH3 1257 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 SCLT1Q96NL6 688 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 PLVAPQ9BX97 442 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
HDLBP-239ENST00000483086 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
HDLBP-239ENST00000483086 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 TECP42680 631 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 RARRES1P49788 294 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 ERVFC1P60507 584 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 IL17AQ16552 155 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 PTPROQ16827 1216 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 TIGD5Q53EQ6 642 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 FERMT3Q86UX7 667 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 ZNF410Q86VK4 478 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 NOSTRINQ8IVI9 506 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 COLGALT1Q8NBJ5 622 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
HDLBP-239ENST00000483086 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 PCDHB6Q9Y5E3 794 aa13.49□□□□□ -0.25
HDLBP-239ENST00000483086 TNFRSF10AO00220 468 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 TBX10O75333 385 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 GLP2RO95838 553 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 RFC5P40937 340 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 PHKA2P46019 1235 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 CAPSQ13938 189 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 AMHR2Q16671 573 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 LEXMQ3ZCV2 418 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 TMEM173Q86WV6 379 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-239ENST00000483086 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
HDLBP-239ENST00000483086 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
HDLBP-239ENST00000483086 PIN4Q9Y237 131 aaKnown RBP13.48□□□□□ -0.25
HDLBP-239ENST00000483086 FGF18O76093 207 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 EDN1P05305 212 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 OR52Z1P0C646 297 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-239ENST00000483086 GLRA2P23416 452 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 ARL2P36404 184 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 DNM2P50570 870 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDLBP-239ENST00000483086 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 RNF149Q8NC42 400 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 VN1R2Q8NFZ6 395 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 BCL7CQ8WUZ0 217 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-239ENST00000483086 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
HDLBP-239ENST00000483086 MTRQ99707 1265 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 POLD4Q9HCU8 107 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 CLDND1Q9NY35 253 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 WDFY4Q6ZS81 3184 aa13.47□□□□□ -0.25
HDLBP-239ENST00000483086 MYH11P35749 1972 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms