RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
COL21A1-209ENST00000482933 UBE2ZQ9H832 354 aaPredicted RBP14.39□□□□□ -0.11
COL21A1-209ENST00000482933 BRMS1Q9HCU9 246 aa14.39□□□□□ -0.11
COL21A1-209ENST00000482933 RGS18Q9NS28 235 aa14.39□□□□□ -0.11
COL21A1-209ENST00000482933 TCF20Q9UGU0 1960 aaKnown RBP14.38□□□□□ -0.11
COL21A1-209ENST00000482933 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL21A1-209ENST00000482933 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
COL21A1-209ENST00000482933 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 UGCGQ16739 394 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 PIK3AP1Q6ZUJ8 805 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 SLC24A5Q71RS6 500 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 FAM228AQ86W67 206 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 LINC01465Q8N7H1 131 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 P2RX5Q93086 422 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 FAM20AQ96MK3 541 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 ADAM2Q99965 735 aa14.38□□□□□ -0.11
COL21A1-209ENST00000482933 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
COL21A1-209ENST00000482933 TBX3O15119 743 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 NCK2O43639 380 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 SLC37A4O43826 429 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 MARCH6O60337 910 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 MGEA5O60502 916 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 CCNT1O60563 726 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 ZSCAN20P17040 1043 aaPredicted RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 KRT2P35908 639 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 NEK4P51957 841 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 PSMC5P62195 406 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 TARBP2Q15633 366 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 ME3Q16798 604 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 MTERF2Q49AM1 385 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 LRRC71Q8N4P6 559 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 ELAC1Q9H777 363 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 KCNMB3Q9NPA1 279 aa14.37□□□□□ -0.11
COL21A1-209ENST00000482933 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
COL21A1-209ENST00000482933 C9IYK1 514 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
COL21A1-209ENST00000482933 DNM2P50570 870 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 GPC3P51654 580 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 PPP2R5CQ13362 524 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 LEXMQ3ZCV2 418 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 TCEAL5Q5H9L2 206 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 SCLT1Q96NL6 688 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 JPH2Q9BR39 696 aaPredicted RBP14.36□□□□□ -0.11
COL21A1-209ENST00000482933 ADAMTS10Q9H324 1103 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
COL21A1-209ENST00000482933 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 GRM6O15303 877 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 MMP1P03956 469 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 P4HBP07237 508 aaKnown RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 FDPSP14324 419 aaKnown RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 KCNA5P22460 613 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 PABPC5Q96DU9 382 aaKnown RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 NECAB3Q96P71 396 aaPredicted RBP14.35□□□□□ -0.11
COL21A1-209ENST00000482933 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 TMEM161AQ9NX61 479 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
COL21A1-209ENST00000482933 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 IGKV6-21A0A0C4DH24 114 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 TBKBP1A7MCY6 615 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 HOXA2O43364 376 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 LARGE1O95461 756 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 DARSP14868 501 aaKnown RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 FAM189BP81408 668 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 TRIM29Q14134 588 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 DSC3Q14574 896 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 EXOC8Q8IYI6 725 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 NSUN7Q8NE18 718 aaKnown RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 NLRP7Q8WX94 980 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 GCOM2Q9BZD3 368 aaPredicted RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 INO80BQ9C086 356 aaPredicted RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
COL21A1-209ENST00000482933 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 PPME1Q9Y570 386 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
COL21A1-209ENST00000482933 FNDC1Q4ZHG4 1894 aaPredicted RBP14.33□□□□□ -0.11
COL21A1-209ENST00000482933 EML1O00423 815 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 MAFO75444 373 aaPredicted RBP14.33□□□□□ -0.11
COL21A1-209ENST00000482933 STBD1O95210 358 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 GATMP50440 423 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 EPHA7Q15375 998 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 FAM102BQ5T8I3 360 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.33□□□□□ -0.11
COL21A1-209ENST00000482933 SPPL3Q8TCT6 385 aa14.33□□□□□ -0.11
COL21A1-209ENST00000482933 ZNF516Q92618 1163 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms