RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 ERMNQ8TAM6 284 aa26.24■■□□□ 1.79
RHBDF1-208ENST00000482904 NSUN3Q9H649 340 aaKnown RBP26.24■■□□□ 1.79
RHBDF1-208ENST00000482904 TECP42680 631 aa26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 FAM189BP81408 668 aa26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 TWF2Q6IBS0 349 aaKnown RBP26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 ECHDC2Q86YB7 292 aa26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 PRPF31Q8WWY3 499 aaKnown RBP26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 P2RX5Q93086 422 aa26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 ALG13Q9NP73 1137 aaKnown RBP26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 AAASQ9NRG9 546 aa26.23■■□□□ 1.79
RHBDF1-208ENST00000482904 SRGAP2CP0DJJ0 459 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 KCNQ1P51787 676 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 LAMTOR4Q0VGL1 99 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 NBR1Q14596 966 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 NAALADL2Q58DX5 795 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 MCTP1Q6DN14 999 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 ADAMTS19Q8TE59 1207 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 TMEM117Q9H0C3 514 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 CHST12Q9NRB3 414 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 ANKEF1Q9NU02 776 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 PCDHB12Q9Y5F1 795 aa26.22■■□□□ 1.79
RHBDF1-208ENST00000482904 DGAT1O75907 488 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 U2AF2P26368 475 aaKnown RBP eCLIP26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 TCEAL5Q5H9L2 206 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 LRRC43Q8N309 656 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 KLHL23Q8NBE8 558 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 RNF149Q8NC42 400 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 PIGOQ8TEQ8 1089 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 UBE2ZQ9H832 354 aaPredicted RBP26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 IFT122Q9HBG6 1241 aa26.21■■□□□ 1.79
RHBDF1-208ENST00000482904 A0A0U1RQF3 1178 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 H3BQV1 296 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 GJB2P29033 226 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 PHKA2P46019 1235 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 FERMT3Q86UX7 667 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 TUFT1Q9NNX1 390 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 HCSTQ9UBK5 93 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 PLAGL2Q9UPG8 496 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 ARID2Q68CP9 1835 aa26.2■■□□□ 1.78
RHBDF1-208ENST00000482904 A0A0C4DFX4 3053 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 ASAP2O43150 1006 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 USO1O60763 962 aaKnown RBP26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 ITGB1P05556 798 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 LAG3P18627 525 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 RARRES1P49788 294 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 TFDP1Q14186 410 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 HAUS3Q68CZ6 603 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 EP400NLQ6ZTU2 488 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 SRGAP1Q7Z6B7 1085 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 THNSL1Q8IYQ7 743 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 UHRF1Q96T88 793 aaPredicted RBP26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 XPNPEP1Q9NQW7 623 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 TYW1Q9NV66 732 aaKnown RBP26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 SMC3Q9UQE7 1217 aa26.19■■□□□ 1.78
RHBDF1-208ENST00000482904 KIAA1671Q9BY89 1806 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 MED24O75448 989 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 KCNA5P22460 613 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 RAB27AP51159 221 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 MXD4Q14582 209 aaPredicted RBP26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 CATSPER3Q86XQ3 398 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 CASD1Q96PB1 797 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 AGPAT5Q9NUQ2 364 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 CUL9Q8IWT3 2517 aa26.18■■□□□ 1.78
RHBDF1-208ENST00000482904 A0A087WWV3 80 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 ERLIN2O94905 339 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 EOMESO95936 686 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 SPATA31C1P0DKV0 1188 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 SKIP12755 728 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 CSPP1Q1MSJ5 1256 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 POTEGQ6S5H5 508 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 COLGALT1Q8NBJ5 622 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 HELQQ8TDG4 1101 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 PPP2R3CQ969Q6 453 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 POLR3CQ9BUI4 534 aaPredicted RBP26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 MRPL9Q9BYD2 267 aaKnown RBP26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 RNF19AQ9NV58 838 aa26.17■■□□□ 1.78
RHBDF1-208ENST00000482904 ATF7P17544 494 aaPredicted RBP26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 CLLU1OSQ5K130 101 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 ZNF598Q86UK7 904 aaKnown RBP26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 POF1BQ8WVV4 589 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 NACC1Q96RE7 527 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 RAB34Q9BZG1 259 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 POLR3FQ9H1D9 316 aaPredicted RBP26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 MINDY3Q9H8M7 445 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 FAM105AQ9NUU6 356 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 PCDHB6Q9Y5E3 794 aa26.16■■□□□ 1.78
RHBDF1-208ENST00000482904 FNDC1Q4ZHG4 1894 aaPredicted RBP26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 XRCC6P12956 609 aaKnown RBP eCLIP26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 RPA1P27694 616 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 FXR2P51116 673 aaKnown RBP eCLIP26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 LONRF3Q496Y0 759 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 SPPL3Q8TCT6 385 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 ASAP3Q8TDY4 903 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 TRAIPQ9BWF2 469 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 CWH43Q9H720 699 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 CLDND1Q9NY35 253 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 LRWD1Q9UFC0 647 aa26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 DBR1Q9UK59 544 aaKnown RBP26.15■■□□□ 1.78
RHBDF1-208ENST00000482904 INO80B-WBP1J3KQ70 363 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms