RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
RPGR-208ENST00000482855 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
RPGR-208ENST00000482855 NKX1-2Q9UD57 310 aaPredicted RBP11.92□□□□□ -0.5
RPGR-208ENST00000482855 POTEMA6NI47 508 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 CNGA1P29973 690 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 LBRQ14739 615 aaKnown RBP11.91□□□□□ -0.5
RPGR-208ENST00000482855 CLUL1Q15846 466 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 DCAF12L1Q5VU92 463 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 KCNK18Q7Z418 384 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 RMDN2Q96LZ7 410 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 GRHL1Q9NZI5 618 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 PRKAG3Q9UGI9 489 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 NENFQ9UMX5 172 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 CETN3O15182 167 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 DDX3YO15523 660 aaKnown RBP11.91□□□□□ -0.5
RPGR-208ENST00000482855 GYG1P46976 350 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 CHRNDQ07001 517 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
RPGR-208ENST00000482855 ARHGEF2Q92974 986 aaKnown RBP11.91□□□□□ -0.5
RPGR-208ENST00000482855 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 RUNDC3BQ96NL0 473 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 OSGEPQ9NPF4 335 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 BMP2KQ9NSY1 1161 aaPredicted RBP11.91□□□□□ -0.5
RPGR-208ENST00000482855 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.91□□□□□ -0.5
RPGR-208ENST00000482855 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
RPGR-208ENST00000482855 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 MYBL1P10243 752 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 GALCP54803 685 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 KLC1Q07866 573 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 MKRN3Q13064 507 aaKnown RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 ZNF211Q13398 564 aaPredicted RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 EXOC3L4Q17RC7 722 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 TSNAXIP1Q2TAA8 658 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 CMPK2Q5EBM0 449 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 RNF43Q68DV7 783 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 SLC17A8Q8NDX2 589 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 CKAP2Q8WWK9 683 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ITFG2Q969R8 447 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 MTMR9Q96QG7 549 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ROPN1BQ9BZX4 212 aaPredicted RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 ROPN1Q9HAT0 212 aaPredicted RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 MLXIPLQ9NP71 852 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 KCNK9Q9NPC2 374 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 IL17RBQ9NRM6 502 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 CYP39A1Q9NYL5 469 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 DDX3XO00571 662 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPGR-208ENST00000482855 RARGP13631 454 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ATP5DP30049 168 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ALDH3A1P30838 453 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 RPL21P46778 160 aaKnown RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 TUBP50607 506 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 PARP6Q2NL67 630 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 SLC4A8Q2Y0W8 1093 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 TMEM119Q4V9L6 283 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 INTS8Q75QN2 995 aaKnown RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 GDAP1Q8TB36 358 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 UTP4Q969X6 686 aaKnown RBP11.9□□□□□ -0.5
RPGR-208ENST00000482855 FGFBP2Q9BYJ0 223 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
RPGR-208ENST00000482855 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.51
RPGR-208ENST00000482855 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.51
RPGR-208ENST00000482855 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PODXLO00592 558 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PHF2O75151 1096 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 PEX11AO75192 247 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 AFPP02771 609 aaKnown RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 TMEM154Q6P9G4 183 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 SLC35G2Q8TBE7 412 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 RFFLQ8WZ73 363 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 C18orf8Q96DM3 657 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
RPGR-208ENST00000482855 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 ATP5HO75947 161 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 GOLGA8HP0CJ92 632 aa11.89□□□□□ -0.51
RPGR-208ENST00000482855 TPBGLP0DKB5 382 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms