RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
COL16A1-212ENST00000482478 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
COL16A1-212ENST00000482478 TCP11Q8WWU5 503 aa17.51■□□□□ 0.39
COL16A1-212ENST00000482478 INO80BQ9C086 356 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-212ENST00000482478 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
COL16A1-212ENST00000482478 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
COL16A1-212ENST00000482478 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
COL16A1-212ENST00000482478 AAASQ9NRG9 546 aa17.51■□□□□ 0.39
COL16A1-212ENST00000482478 HCSTQ9UBK5 93 aa17.51■□□□□ 0.39
COL16A1-212ENST00000482478 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
COL16A1-212ENST00000482478 ZNF174Q15697 407 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 KLHL23Q8NBE8 558 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 ERMNQ8TAM6 284 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 P2RX5Q93086 422 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 PPP2R3CQ969Q6 453 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 TMEM117Q9H0C3 514 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 DHX33Q9H6R0 707 aaKnown RBP17.5■□□□□ 0.39
COL16A1-212ENST00000482478 PCDHB12Q9Y5F1 795 aa17.5■□□□□ 0.39
COL16A1-212ENST00000482478 FNDC1Q4ZHG4 1894 aaPredicted RBP17.5■□□□□ 0.39
COL16A1-212ENST00000482478 USO1O60763 962 aaKnown RBP17.49■□□□□ 0.39
COL16A1-212ENST00000482478 ITGB1P05556 798 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 SRGAP2CP0DJJ0 459 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 LAG3P18627 525 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 HAUS3Q68CZ6 603 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 ECHDC2Q86YB7 292 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
COL16A1-212ENST00000482478 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 CLDND1Q9NY35 253 aa17.49■□□□□ 0.39
COL16A1-212ENST00000482478 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 ERLIN2O94905 339 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 SLITRK3O94933 977 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 PHKA2P46019 1235 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 LAMTOR4Q0VGL1 99 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 NBR1Q14596 966 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 NAALADL2Q58DX5 795 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 COLGALT1Q8NBJ5 622 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 RNF149Q8NC42 400 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 HELQQ8TDG4 1101 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 POF1BQ8WVV4 589 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 PRPF31Q8WWY3 499 aaKnown RBP17.48■□□□□ 0.39
COL16A1-212ENST00000482478 MRPL9Q9BYD2 267 aaKnown RBP17.48■□□□□ 0.39
COL16A1-212ENST00000482478 PLAGL2Q9UPG8 496 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 TTC28Q96AY4 2481 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 REV3LO60673 3130 aa17.48■□□□□ 0.39
COL16A1-212ENST00000482478 ZBTB39O15060 712 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 DGAT1O75907 488 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 LYPLA2O95372 231 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 CD2BP2O95400 341 aaKnown RBP17.47■□□□□ 0.39
COL16A1-212ENST00000482478 TECP42680 631 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 RAB27AP51159 221 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 TFDP1Q14186 410 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 CLLU1OSQ5K130 101 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 POTEGQ6S5H5 508 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 FERMT3Q86UX7 667 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 PIGOQ8TEQ8 1089 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 AGPAT5Q9NUQ2 364 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 TYW1Q9NV66 732 aaKnown RBP17.47■□□□□ 0.39
COL16A1-212ENST00000482478 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
COL16A1-212ENST00000482478 A0A0U1RQF3 1178 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 H3BQ06 376 aaPredicted RBP17.46■□□□□ 0.39
COL16A1-212ENST00000482478 H3BQV1 296 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
COL16A1-212ENST00000482478 MCM2P49736 904 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 RARRES1P49788 294 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 PABPC5Q96DU9 382 aaKnown RBP17.46■□□□□ 0.39
COL16A1-212ENST00000482478 ZNF558Q96NG5 402 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 POLR3FQ9H1D9 316 aaPredicted RBP17.46■□□□□ 0.39
COL16A1-212ENST00000482478 IFT122Q9HBG6 1241 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 XPNPEP1Q9NQW7 623 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 FAM105AQ9NUU6 356 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 RNF19AQ9NV58 838 aa17.46■□□□□ 0.39
COL16A1-212ENST00000482478 PLXNA4Q9HCM2 1894 aa17.46■□□□□ 0.38
COL16A1-212ENST00000482478 BRWD1Q9NSI6 2320 aa17.46■□□□□ 0.38
COL16A1-212ENST00000482478 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 FGF18O76093 207 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 SKIP12755 728 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 GJB2P29033 226 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 PPM1AP35813 382 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 PBX3P40426 434 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 FAM189BP81408 668 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 MXD4Q14582 209 aaPredicted RBP17.45■□□□□ 0.38
COL16A1-212ENST00000482478 LPPQ93052 612 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 CASD1Q96PB1 797 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 IGFLR1Q9H665 355 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 TUFT1Q9NNX1 390 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 TLR9Q9NR96 1032 aa17.45■□□□□ 0.38
COL16A1-212ENST00000482478 MUC3AQ02505 3323 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL16A1-212ENST00000482478 MED24O75448 989 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 BMP1P13497 986 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms