RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 PABPC5Q96DU9 382 aaKnown RBP25.4■■□□□ 1.66
CYTH3-208ENST00000482460 HSD17B14Q9BPX1 270 aa25.4■■□□□ 1.66
CYTH3-208ENST00000482460 TMEM117Q9H0C3 514 aa25.4■■□□□ 1.66
CYTH3-208ENST00000482460 FOXP1Q9H334 677 aaPredicted RBP25.4■■□□□ 1.66
CYTH3-208ENST00000482460 TYW1Q9NV66 732 aaKnown RBP25.4■■□□□ 1.66
CYTH3-208ENST00000482460 ZBTB39O15060 712 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 GAS2O43903 313 aaKnown RBP25.39■■□□□ 1.66
CYTH3-208ENST00000482460 LYPLA2O95372 231 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 EOMESO95936 686 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 XKR9Q5GH70 373 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 FAM184AQ8NB25 1140 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 NLRP4Q96MN2 994 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 NECAB3Q96P71 396 aaPredicted RBP25.39■■□□□ 1.66
CYTH3-208ENST00000482460 CASD1Q96PB1 797 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 RNF19AQ9NV58 838 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 COL4A3BPQ9Y5P4 624 aa25.39■■□□□ 1.66
CYTH3-208ENST00000482460 MUC3AQ02505 3323 aa25.39■■□□□ 1.65
CYTH3-208ENST00000482460 ATP2B1P20020 1258 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 DNAJB1P25685 340 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 MCM7P33993 719 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 RABEP1Q15276 862 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 POF1BQ8WVV4 589 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 TCP11Q8WWU5 503 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 PRPF31Q8WWY3 499 aaKnown RBP25.38■■□□□ 1.65
CYTH3-208ENST00000482460 PSPC1Q8WXF1 523 aaKnown RBP25.38■■□□□ 1.65
CYTH3-208ENST00000482460 TMEM143Q96AN5 459 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 TMEM60Q9H2L4 133 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 CWH43Q9H720 699 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 IFT122Q9HBG6 1241 aa25.38■■□□□ 1.65
CYTH3-208ENST00000482460 EMC2Q15006 297 aa25.37■■□□□ 1.65
CYTH3-208ENST00000482460 ZNF598Q86UK7 904 aaKnown RBP25.37■■□□□ 1.65
CYTH3-208ENST00000482460 ABI1Q8IZP0 508 aa25.37■■□□□ 1.65
CYTH3-208ENST00000482460 COLGALT1Q8NBJ5 622 aa25.37■■□□□ 1.65
CYTH3-208ENST00000482460 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.37■■□□□ 1.65
CYTH3-208ENST00000482460 TRAIPQ9BWF2 469 aa25.37■■□□□ 1.65
CYTH3-208ENST00000482460 ARID2Q68CP9 1835 aa25.37■■□□□ 1.65
CYTH3-208ENST00000482460 PLXNA4Q9HCM2 1894 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 ASAP2O43150 1006 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 LAG3P18627 525 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 UBE3AQ05086 875 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 HYAL1Q12794 435 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 CSPP1Q1MSJ5 1256 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 CATSPER4Q7RTX7 472 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 RNF169Q8NCN4 708 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 ANKEF1Q9NU02 776 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 CLDND1Q9NY35 253 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 HCSTQ9UBK5 93 aa25.36■■□□□ 1.65
CYTH3-208ENST00000482460 CSPG5O95196 566 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 ATF7P17544 494 aaPredicted RBP25.35■■□□□ 1.65
CYTH3-208ENST00000482460 LAMTOR4Q0VGL1 99 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 ORC2Q13416 577 aaPredicted RBP25.35■■□□□ 1.65
CYTH3-208ENST00000482460 CTC1Q2NKJ3 1217 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 TWF2Q6IBS0 349 aaKnown RBP25.35■■□□□ 1.65
CYTH3-208ENST00000482460 LRRC55Q6ZSA7 311 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 EP400NLQ6ZTU2 488 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 SRGAP1Q7Z6B7 1085 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 PPP2R3CQ969Q6 453 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 MTRQ99707 1265 aa25.35■■□□□ 1.65
CYTH3-208ENST00000482460 BMP2KQ9NSY1 1161 aaPredicted RBP25.35■■□□□ 1.65
CYTH3-208ENST00000482460 PIN4Q9Y237 131 aaKnown RBP25.35■■□□□ 1.65
CYTH3-208ENST00000482460 POTEMA6NI47 508 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 ST18O60284 1047 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 FGF18O76093 207 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 SRGAP2CP0DJJ0 459 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 SKIP12755 728 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 PHKA2P46019 1235 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 GNL2Q13823 731 aaKnown RBP25.34■■□□□ 1.65
CYTH3-208ENST00000482460 PUS10Q3MIT2 529 aaKnown RBP25.34■■□□□ 1.65
CYTH3-208ENST00000482460 CLLU1OSQ5K130 101 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 FERMT3Q86UX7 667 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 NOSTRINQ8IVI9 506 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 THNSL1Q8IYQ7 743 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 LRRC43Q8N309 656 aa25.34■■□□□ 1.65
CYTH3-208ENST00000482460 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
CYTH3-208ENST00000482460 H3BQ06 376 aaPredicted RBP25.33■■□□□ 1.65
CYTH3-208ENST00000482460 XRCC6P12956 609 aaKnown RBP eCLIP25.33■■□□□ 1.65
CYTH3-208ENST00000482460 IRS1P35568 1242 aa25.33■■□□□ 1.65
CYTH3-208ENST00000482460 ZNF174Q15697 407 aa25.33■■□□□ 1.65
CYTH3-208ENST00000482460 PTCRAQ6ISU1 281 aaPredicted RBP25.33■■□□□ 1.65
CYTH3-208ENST00000482460 IGFLR1Q9H665 355 aa25.33■■□□□ 1.65
CYTH3-208ENST00000482460 XPNPEP1Q9NQW7 623 aa25.33■■□□□ 1.65
CYTH3-208ENST00000482460 GRXCR2A6NFK2 248 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 DGAT1O75907 488 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 LTBRP36941 435 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 TRAPPC10P48553 1259 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 MXD4Q14582 209 aaPredicted RBP25.32■■□□□ 1.64
CYTH3-208ENST00000482460 RNF149Q8NC42 400 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 HELQQ8TDG4 1101 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 RSPH1Q8WYR4 309 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 MINDY3Q9H8M7 445 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 AGPAT5Q9NUQ2 364 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 FAM105AQ9NUU6 356 aa25.32■■□□□ 1.64
CYTH3-208ENST00000482460 ZNF623O75123 536 aa25.31■■□□□ 1.64
CYTH3-208ENST00000482460 OR52Z1P0C646 297 aa25.31■■□□□ 1.64
CYTH3-208ENST00000482460 SPATA31C1P0DKV0 1188 aa25.31■■□□□ 1.64
CYTH3-208ENST00000482460 U2AF2P26368 475 aaKnown RBP eCLIP25.31■■□□□ 1.64
CYTH3-208ENST00000482460 GTF2F1P35269 517 aaKnown RBP eCLIP25.31■■□□□ 1.649e-7■■■■■ 27.6
CYTH3-208ENST00000482460 TECP42680 631 aa25.31■■□□□ 1.64
CYTH3-208ENST00000482460 RARRES1P49788 294 aa25.31■■□□□ 1.64
CYTH3-208ENST00000482460 RAB27AP51159 221 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms