RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 DAW1Q8N136 415 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 TMEM87AQ8NBN3 555 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 PRPF31Q8WWY3 499 aaKnown RBP13.6□□□□□ -0.23
TRA2B-212ENST00000480461 STAMQ92783 540 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 SCLYQ96I15 445 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 ADAMTS10Q9H324 1103 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 EPHX3Q9H6B9 360 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 SUCLA2Q9P2R7 463 aaPredicted RBP13.6□□□□□ -0.23
TRA2B-212ENST00000480461 KCNH3Q9ULD8 1083 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
TRA2B-212ENST00000480461 DGAT1O75907 488 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 POLGP54098 1239 aaPredicted RBP13.59□□□□□ -0.23
TRA2B-212ENST00000480461 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
TRA2B-212ENST00000480461 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 TCTN1Q2MV58 587 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 DHX58Q96C10 678 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
TRA2B-212ENST00000480461 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 PPME1Q9Y570 386 aa13.59□□□□□ -0.23
TRA2B-212ENST00000480461 MYMKA6NI61 221 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 NBNO60934 754 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 CTSHP09668 335 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 SELPP16109 830 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 LIG1P18858 919 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 RABGGTBP53611 331 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 BFSP2Q13515 415 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 GIT2Q14161 759 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 IER5Q5VY09 327 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 FMR1NBQ8N0W7 255 aaPredicted RBP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 NME8Q8N427 588 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 RETREG2Q8NC44 543 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 TMEM40Q8WWA1 233 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 SLC7A3Q8WY07 619 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 BSNDQ8WZ55 320 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 CELF4Q9BZC1 486 aaKnown RBP13.58□□□□□ -0.24
TRA2B-212ENST00000480461 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 FAM13BQ9NYF5 915 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 STK17AQ9UEE5 414 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 CDY2AQ9Y6F7 541 aa13.58□□□□□ -0.24
TRA2B-212ENST00000480461 RSPH10B2B2RC85 870 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
TRA2B-212ENST00000480461 RSPH10BP0C881 870 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 GLRA2P23416 452 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 CASP1P29466 404 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 TXLNAP40222 546 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 STAT6P42226 847 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 GPC3P51654 580 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 MRPS6P82932 125 aaKnown RBP13.57□□□□□ -0.24
TRA2B-212ENST00000480461 LAMTOR4Q0VGL1 99 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 GPBP1Q86WP2 473 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 GRAMD1CQ8IYS0 662 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 IQUBQ8NA54 791 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
TRA2B-212ENST00000480461 DNAJC19Q96DA6 116 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
TRA2B-212ENST00000480461 ATP6V0A4Q9HBG4 840 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 C11orf16Q9NQ32 467 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 LMBRD1Q9NUN5 540 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
TRA2B-212ENST00000480461 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 A0A087WZ62 844 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 HIP1RO75146 1068 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 ZNF202O95125 648 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 FGBP02675 491 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 SRGAP2CP0DJJ0 459 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 MYOGP15173 224 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 GUCY2CP25092 1073 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 TMOD1P28289 359 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 DNM2P50570 870 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 LPIN1Q14693 890 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
TRA2B-212ENST00000480461 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 RHPN2Q8IUC4 686 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms