RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 AGO3Q9H9G7 860 aaKnown RBP21.88■■□□□ 1.09
LIME1-205ENST00000480139 IFT122Q9HBG6 1241 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 GDPD2Q9HCC8 539 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 GPRC5CQ9NQ84 441 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 PADI3Q9ULW8 664 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 NOC2LQ9Y3T9 749 aaKnown RBP21.88■■□□□ 1.09
LIME1-205ENST00000480139 ABHD14A-ACY1A0A1B0GW23 586 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 GPR182O15218 404 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 CD52P31358 61 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 PHKA2P46019 1235 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 CAPSQ13938 189 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 IKBKEQ14164 716 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 PPP2R5AQ15172 486 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 SHHQ15465 462 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 CSPP1Q1MSJ5 1256 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 ARSHQ5FYA8 562 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 C9orf50Q5SZB4 431 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 MAEAQ7L5Y9 396 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 SRGAP1Q7Z6B7 1085 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 GPBP1Q86WP2 473 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 PDILTQ8N807 584 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 IQUBQ8NA54 791 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 RNF149Q8NC42 400 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 FTHL17Q9BXU8 183 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 C17orf75Q9HAS0 396 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 ERVK-5Q9HDB9 667 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 ODF2LQ9ULJ1 636 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 COLQQ9Y215 455 aaPredicted RBP21.87■■□□□ 1.09
LIME1-205ENST00000480139 HPSEQ9Y251 543 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 MYH11P35749 1972 aa21.87■■□□□ 1.09
LIME1-205ENST00000480139 HIP1RO75146 1068 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 NAMPTP43490 491 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 MAPK7Q13164 816 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 PCBP1Q15365 356 aaKnown RBP eCLIP21.86■■□□□ 1.096e-7■■■■□ 25.9
LIME1-205ENST00000480139 SV2BQ7L1I2 683 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 OTOP2Q7RTS6 562 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 FAM228AQ86W67 206 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 DAW1Q8N136 415 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 PANK2Q9BZ23 570 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 MAGEF1Q9HAY2 307 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 KCNH3Q9ULD8 1083 aa21.86■■□□□ 1.09
LIME1-205ENST00000480139 RANBP2P49792 3224 aaKnown RBP21.85■■□□□ 1.09
LIME1-205ENST00000480139 SRGAP2CP0DJJ0 459 aa21.85■■□□□ 1.09
LIME1-205ENST00000480139 SFPQP23246 707 aaKnown RBP eCLIP21.85■■□□□ 1.09
LIME1-205ENST00000480139 PTENP60484 403 aa21.85■■□□□ 1.09
LIME1-205ENST00000480139 TCTN1Q2MV58 587 aa21.85■■□□□ 1.09
LIME1-205ENST00000480139 CDCA2Q69YH5 1023 aaPredicted RBP21.85■■□□□ 1.09
LIME1-205ENST00000480139 ZNF668Q96K58 619 aaPredicted RBP21.85■■□□□ 1.09
LIME1-205ENST00000480139 IFT74Q96LB3 600 aa21.85■■□□□ 1.09
LIME1-205ENST00000480139 RNPC3Q96LT9 517 aaKnown RBP21.85■■□□□ 1.09
LIME1-205ENST00000480139 TNMDQ9H2S6 317 aa21.85■■□□□ 1.09
LIME1-205ENST00000480139 POLR2DO15514 142 aaKnown RBP21.84■■□□□ 1.09
LIME1-205ENST00000480139 PFKFB1P16118 471 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 DHX8Q14562 1220 aaKnown RBP21.84■■□□□ 1.09
LIME1-205ENST00000480139 TMEM87AQ8NBN3 555 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 BSNDQ8WZ55 320 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 MRPS27Q92552 414 aaKnown RBP21.84■■□□□ 1.09
LIME1-205ENST00000480139 REEP2Q9BRK0 252 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 KBTBD4Q9NVX7 518 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 USP25Q9UHP3 1055 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 KCNG1Q9UIX4 513 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 ST3GAL5Q9UNP4 418 aa21.84■■□□□ 1.09
LIME1-205ENST00000480139 CLEC17AQ6ZS10 378 aa21.83■■□□□ 1.09
LIME1-205ENST00000480139 DHX58Q96C10 678 aa21.83■■□□□ 1.09
LIME1-205ENST00000480139 LRRC27Q9C0I9 530 aa21.83■■□□□ 1.09
LIME1-205ENST00000480139 C2orf40Q9H1Z8 148 aa21.83■■□□□ 1.09
LIME1-205ENST00000480139 PTPRSQ13332 1948 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 A0A1B0GVL5 298 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 GOLGA6L4A6NEF3 574 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 LRRIQ4A6NIV6 560 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 KRT18P05783 430 aaKnown RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 ZNF131P52739 623 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 WDR5P61964 334 aaKnown RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 MBTD1Q05BQ5 628 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 NFX1Q12986 1120 aaKnown RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 DMP1Q13316 513 aaPredicted RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 GIT2Q14161 759 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 NTPCRQ9BSD7 190 aaKnown RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 TMX1Q9H3N1 280 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 MINDY3Q9H8M7 445 aa21.82■■□□□ 1.08
LIME1-205ENST00000480139 CXXC1Q9P0U4 656 aaPredicted RBP21.82■■□□□ 1.08
LIME1-205ENST00000480139 PHLPP2Q6ZVD8 1323 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 NPHP3-ACAD11A0A0J9YXS1 232 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 MYMKA6NI61 221 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 PLS3P13797 630 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 NPTX2P47972 431 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 KCNJ6P48051 423 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 AMPD3Q01432 767 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 RAD51AP2Q09MP3 1159 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 CNNM4Q6P4Q7 775 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 ZBTB8OSQ8IWT0 167 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 FSIP1Q8NA03 581 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 PHOSPHO2Q8TCD6 241 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 SPIRE2Q8WWL2 714 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 DDX12PQ92771 950 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 KCNN1Q92952 543 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 SLC9A7Q96T83 725 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 TSPYL2Q9H2G4 693 aaPredicted RBP21.81■■□□□ 1.08
LIME1-205ENST00000480139 CHST12Q9NRB3 414 aa21.81■■□□□ 1.08
LIME1-205ENST00000480139 LARSQ9P2J5 1176 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms