RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 IFT122Q9HBG6 1241 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 XPNPEP1Q9NQW7 623 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 TMEM161AQ9NX61 479 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 DBR1Q9UK59 544 aaKnown RBP11.75□□□□□ -0.53
SP140-210ENST00000479539 LRFN2Q9ULH4 789 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 KAT6AQ92794 2004 aa11.75□□□□□ -0.53
SP140-210ENST00000479539 A0A087WWV3 80 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 A0A0U1RQF3 1178 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 LAD1O00515 517 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 SFPQP23246 707 aaKnown RBP eCLIP11.74□□□□□ -0.53
SP140-210ENST00000479539 PRPHP41219 470 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
SP140-210ENST00000479539 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 FERMT3Q86UX7 667 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 MTRQ99707 1265 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 MRPL42Q9Y6G3 142 aaKnown RBP11.74□□□□□ -0.53
SP140-210ENST00000479539 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
SP140-210ENST00000479539 EOMESO95936 686 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 ARL2P36404 184 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 GATMP50440 423 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 TTC3P53804 2025 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 GPM6BQ13491 265 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 COL4A6Q14031 1691 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 IL17AQ16552 155 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 ECM1Q16610 540 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 PRRC2BQ5JSZ5 2229 aaKnown RBP11.73□□□□□ -0.53
SP140-210ENST00000479539 FAM102BQ5T8I3 360 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
SP140-210ENST00000479539 ECHDC2Q86YB7 292 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
SP140-210ENST00000479539 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
SP140-210ENST00000479539 PLVAPQ9BX97 442 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 PRDM6Q9NQX0 595 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
SP140-210ENST00000479539 DACT1Q9NYF0 836 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
SP140-210ENST00000479539 FGFR1P11362 822 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 PDCP20941 246 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
SP140-210ENST00000479539 CTNNB1P35222 781 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 PTENP60484 403 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
SP140-210ENST00000479539 PTPROQ16827 1216 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
SP140-210ENST00000479539 NAALADL2Q58DX5 795 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 DTHD1Q6ZMT9 781 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 MICALL1Q8N3F8 863 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 P2RX5Q93086 422 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
SP140-210ENST00000479539 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
SP140-210ENST00000479539 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 HOXA2O43364 376 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 ZNF623O75123 536 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 CYP11B2P19099 503 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 IBSPP21815 317 aaPredicted RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 GLRA2P23416 452 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 CCT6AP40227 531 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 PHKA2P46019 1235 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 TFDP1Q14186 410 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
SP140-210ENST00000479539 ARL6IP4Q66PJ3 421 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 MCPH1Q8NEM0 835 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 ASAP3Q8TDY4 903 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 ATXN2LQ8WWM7 1075 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 SNX21Q969T3 373 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 CCDC43Q96MW1 224 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 CASD1Q96PB1 797 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 NFKBIZQ9BYH8 718 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 LMAN2LQ9H0V9 348 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 PLAGL2Q9UPG8 496 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
SP140-210ENST00000479539 PIN4Q9Y237 131 aaKnown RBP11.71□□□□□ -0.53
SP140-210ENST00000479539 EYSQ5T1H1 3165 aa11.71□□□□□ -0.54
SP140-210ENST00000479539 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.54
SP140-210ENST00000479539 MICAL3Q7RTP6 2002 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
SP140-210ENST00000479539 GRM6O15303 877 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms