RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 SPPL3Q8TCT6 385 aa19.89■□□□□ 0.77
HLA-A-206ENST00000479320 NLRP4Q96MN2 994 aa19.89■□□□□ 0.77
HLA-A-206ENST00000479320 NECAB3Q96P71 396 aaPredicted RBP19.89■□□□□ 0.77
HLA-A-206ENST00000479320 INO80BQ9C086 356 aaPredicted RBP19.89■□□□□ 0.77
HLA-A-206ENST00000479320 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
HLA-A-206ENST00000479320 FOXP1Q9H334 677 aaPredicted RBP19.89■□□□□ 0.77
HLA-A-206ENST00000479320 RNF19AQ9NV58 838 aa19.89■□□□□ 0.77
HLA-A-206ENST00000479320 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
HLA-A-206ENST00000479320 PLXNA4Q9HCM2 1894 aa19.89■□□□□ 0.77
HLA-A-206ENST00000479320 A0A0U1RQF3 1178 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 KCNA5P22460 613 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 DNAJB1P25685 340 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 MCM7P33993 719 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 RABEP1Q15276 862 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 SPOUT1Q5T280 376 aaKnown RBP19.88■□□□□ 0.77
HLA-A-206ENST00000479320 PRPF31Q8WWY3 499 aaKnown RBP19.88■□□□□ 0.77
HLA-A-206ENST00000479320 TMEM143Q96AN5 459 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 CASD1Q96PB1 797 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 IFT122Q9HBG6 1241 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 CHST12Q9NRB3 414 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 BMP2KQ9NSY1 1161 aaPredicted RBP19.88■□□□□ 0.77
HLA-A-206ENST00000479320 HCSTQ9UBK5 93 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 COL4A3BPQ9Y5P4 624 aa19.88■□□□□ 0.77
HLA-A-206ENST00000479320 CSPG5O95196 566 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 LYPLA2O95372 231 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 SFPQP23246 707 aaKnown RBP eCLIP19.87■□□□□ 0.77
HLA-A-206ENST00000479320 COL19A1Q14993 1142 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 LEXMQ3ZCV2 418 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 NEK9Q8TD19 979 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 PABPC5Q96DU9 382 aaKnown RBP19.87■□□□□ 0.77
HLA-A-206ENST00000479320 CWH43Q9H720 699 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 AAASQ9NRG9 546 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 DACT1Q9NYF0 836 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 PCDHB12Q9Y5F1 795 aa19.87■□□□□ 0.77
HLA-A-206ENST00000479320 BDP1A6H8Y1 2624 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 HOXA2O43364 376 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 EOMESO95936 686 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 EMC2Q15006 297 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 LRRC55Q6ZSA7 311 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 ZNF598Q86UK7 904 aaKnown RBP19.86■□□□□ 0.77
HLA-A-206ENST00000479320 RNF169Q8NCN4 708 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.86■□□□□ 0.77
HLA-A-206ENST00000479320 POF1BQ8WVV4 589 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 TCP11Q8WWU5 503 aa19.86■□□□□ 0.77
HLA-A-206ENST00000479320 PSPC1Q8WXF1 523 aaKnown RBP19.86■□□□□ 0.77
HLA-A-206ENST00000479320 POTEMA6NI47 508 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 ASAP2O43150 1006 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 GAS2O43903 313 aaKnown RBP19.85■□□□□ 0.77
HLA-A-206ENST00000479320 SRGAP2CP0DJJ0 459 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 ATF7P17544 494 aaPredicted RBP19.85■□□□□ 0.77
HLA-A-206ENST00000479320 LAMTOR4Q0VGL1 99 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 HYAL1Q12794 435 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 ZNF174Q15697 407 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 CATSPER4Q7RTX7 472 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 NOSTRINQ8IVI9 506 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 ABI1Q8IZP0 508 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 COLGALT1Q8NBJ5 622 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 MTRQ99707 1265 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 TRAIPQ9BWF2 469 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 XPNPEP1Q9NQW7 623 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 ANKEF1Q9NU02 776 aa19.85■□□□□ 0.77
HLA-A-206ENST00000479320 A0A087WWV3 80 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 NCK2O43639 380 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 ST18O60284 1047 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 IRS1P35568 1242 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 PHKA2P46019 1235 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 GNL2Q13823 731 aaKnown RBP19.84■□□□□ 0.77
HLA-A-206ENST00000479320 CLLU1OSQ5K130 101 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 TWF2Q6IBS0 349 aaKnown RBP19.84■□□□□ 0.77
HLA-A-206ENST00000479320 EP400NLQ6ZTU2 488 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 SRGAP1Q7Z6B7 1085 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 FERMT3Q86UX7 667 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 MINDY3Q9H8M7 445 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 CLDND1Q9NY35 253 aa19.84■□□□□ 0.77
HLA-A-206ENST00000479320 PIN4Q9Y237 131 aaKnown RBP19.84■□□□□ 0.77
HLA-A-206ENST00000479320 H3BQ06 376 aaPredicted RBP19.83■□□□□ 0.77
HLA-A-206ENST00000479320 FGF18O76093 207 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 SPATA31C1P0DKV0 1188 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 LAG3P18627 525 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 GTF2F1P35269 517 aaKnown RBP eCLIP19.83■□□□□ 0.77
HLA-A-206ENST00000479320 LTBRP36941 435 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 TECP42680 631 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 ORC2Q13416 577 aaPredicted RBP19.83■□□□□ 0.77
HLA-A-206ENST00000479320 CTC1Q2NKJ3 1217 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 TTC38Q5R3I4 469 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 HELQQ8TDG4 1101 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 PIGOQ8TEQ8 1089 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 IGFLR1Q9H665 355 aa19.83■□□□□ 0.77
HLA-A-206ENST00000479320 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.77
HLA-A-206ENST00000479320 OR52Z1P0C646 297 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
HLA-A-206ENST00000479320 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.76
HLA-A-206ENST00000479320 RARRES1P49788 294 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 UBE3AQ05086 875 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 CSPP1Q1MSJ5 1256 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 ADGRD2Q7Z7M1 963 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 CATSPER3Q86XQ3 398 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 THNSL1Q8IYQ7 743 aa19.82■□□□□ 0.76
HLA-A-206ENST00000479320 LRRC43Q8N309 656 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms