RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 NXPE3Q969Y0 559 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 PIGSQ96S52 555 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 DNAJB4Q9UDY4 337 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 WASF3Q9UPY6 502 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 COL4A2P08572 1712 aa14.07□□□□□ -0.16
HDAC8-217ENST00000478743 LILRB3O75022 631 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 VTNP04004 478 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 KLRC1P26715 233 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
HDAC8-217ENST00000478743 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 SOWAHCQ53LP3 525 aaPredicted RBP14.06□□□□□ -0.16
HDAC8-217ENST00000478743 PCNX4Q63HM2 1172 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 IL31Q6EBC2 164 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 PPFIBP1Q86W92 1011 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
HDAC8-217ENST00000478743 CLDN23Q96B33 292 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 RAB23Q9ULC3 237 aa14.06□□□□□ -0.16
HDAC8-217ENST00000478743 MTCL1Q9Y4B5 1905 aaKnown RBP14.05□□□□□ -0.16
HDAC8-217ENST00000478743 A0A0D9SFI3 127 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 MEIS3P2A8K0S8 358 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 ZBTB42B2RXF5 422 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 GIPC1O14908 333 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 HOXA2O43364 376 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 LRP3O75074 770 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 GPR32O75388 356 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 FGFR4P22455 802 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 HOXC13P31276 330 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 SLC11A1P49279 550 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 ALDH7A1P49419 539 aaKnown RBP14.05□□□□□ -0.16
HDAC8-217ENST00000478743 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 USP17L6PQ6QN14 398 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 ZNF589Q86UQ0 364 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-217ENST00000478743 NME8Q8N427 588 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 SAMD3Q8N6K7 520 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 GATA6Q92908 595 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 SHDQ96IW2 340 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 ZNF668Q96K58 619 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-217ENST00000478743 FAM227BQ96M60 508 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 MAD2L2Q9UI95 211 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 ADAMTS20P59510 1910 aa14.05□□□□□ -0.16
HDAC8-217ENST00000478743 LAMA5O15230 3695 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 KLRF2D3W0D1 207 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 CYTH3O43739 400 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 KCNK5O95279 499 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 GALTP07902 379 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 SPATA31D3P0C874 917 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 GIT2Q14161 759 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 PSAPL1Q6NUJ1 521 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 SPATA31D4Q6ZUB0 917 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 TPRG1Q6ZUI0 275 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 DDX1Q92499 740 aaKnown RBP14.04□□□□□ -0.16
HDAC8-217ENST00000478743 STAMQ92783 540 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 LPPQ93052 612 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 OSBPL6Q9BZF3 934 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-217ENST00000478743 LAMA1P25391 3075 aa14.04□□□□□ -0.16
HDAC8-217ENST00000478743 C2CD2LO14523 706 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 HRO43593 1189 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 CRYBB1P53674 252 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-217ENST00000478743 PRKCQQ04759 706 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 FOXC1Q12948 553 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 BMS1Q14692 1282 aaKnown RBP14.03□□□□□ -0.16
HDAC8-217ENST00000478743 NLRX1Q86UT6 975 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 ZCCHC14Q8WYQ9 949 aaKnown RBP14.03□□□□□ -0.16
HDAC8-217ENST00000478743 GPRASP2Q96D09 838 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 GPATCH3Q96I76 525 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 TICRRQ7Z2Z1 1910 aa14.03□□□□□ -0.16
HDAC8-217ENST00000478743 IGSF10Q6WRI0 2623 aa14.02□□□□□ -0.16
HDAC8-217ENST00000478743 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 B4E1Z4 1266 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 MAGEA9P43362 315 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 NTHL1P78549 312 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-217ENST00000478743 ZBTB41Q5SVQ8 909 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 TAS1R1Q7RTX1 841 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-217ENST00000478743 CELF5Q8N6W0 485 aaKnown RBP14.02□□□□□ -0.17
HDAC8-217ENST00000478743 GIMAP8Q8ND71 665 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-217ENST00000478743 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 ESR2Q92731 530 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 ZSCAN10Q96SZ4 725 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-217ENST00000478743 KXD1Q9BQD3 176 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 EMILIN2Q9BXX0 1053 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 ADAM33Q9BZ11 813 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 GBP3Q9H0R5 595 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
HDAC8-217ENST00000478743 C22orf31O95567 290 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
HDAC8-217ENST00000478743 LIMK1P53667 647 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 SIM2Q14190 667 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-217ENST00000478743 ZNF280BQ86YH2 543 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 ZNF687Q8N1G0 1237 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 MRPL9Q9BYD2 267 aaKnown RBP14.01□□□□□ -0.17
HDAC8-217ENST00000478743 RHOBTB2Q9BYZ6 727 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 SMOC1Q9H4F8 434 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 JPH1Q9HDC5 661 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms