RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 GABBR1Q9UBS5 961 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 FHOD1Q9Y613 1164 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KIAA1217Q5T5P2 1943 aa13.6□□□□□ -0.23
TRAF3IP3-213ENST00000478359 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 RGS20O76081 388 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 SLC25A27O95847 323 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PEX3P56589 373 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 MYL7Q01449 175 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 XKR3Q5GH77 459 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 MAP4K3Q8IVH8 894 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KCNN1Q92952 543 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 SIX2Q9NPC8 291 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 APEX2Q9UBZ4 518 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ARID2Q68CP9 1835 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 OTOFQ9HC10 1997 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ENC1O14682 589 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 TGFB3P10600 412 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ACTN1P12814 892 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 VAMP7P51809 220 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ACTR2P61160 394 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 NAB2Q15742 525 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PARD6BQ9BYG5 372 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ATP6V0A4Q9HBG4 840 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 ARFGAP3Q9NP61 516 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 SNX12Q9UMY4 172 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 HYOU1Q9Y4L1 999 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 PPME1Q9Y570 386 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 DUSP10Q9Y6W6 482 aa13.59□□□□□ -0.23
TRAF3IP3-213ENST00000478359 IGSF9BQ9UPX0 1349 aa13.58□□□□□ -0.23
TRAF3IP3-213ENST00000478359 WDR81Q562E7 1941 aa13.58□□□□□ -0.23
TRAF3IP3-213ENST00000478359 IRF6O14896 467 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ATG7O95352 703 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ALDH5A1P51649 535 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PTK2Q05397 1052 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PRKG1Q13976 671 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KSR1Q8IVT5 923 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 HSPBP1Q9NZL4 362 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
TRAF3IP3-213ENST00000478359 A0A087X0T9 212 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SPDYE5A6NIY4 337 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CCDC169A6NNP5 214 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KIAA0391O15091 583 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SLC16A4O15374 487 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FAM228BP0C875 321 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SOX5P35711 763 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NPTX2P47972 431 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NPEPPSP55786 919 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ARID5AQ03989 594 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NEDD9Q14511 834 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 KIAA0753Q2KHM9 967 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 BRDTQ58F21 947 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 FASTKD5Q7L8L6 764 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 RUBCNQ92622 972 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 SPATC1LQ9H0A9 340 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CYP26B1Q9NR63 512 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TFR2Q9UP52 801 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 USP20Q9Y2K6 914 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MAFBQ9Y5Q3 323 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TARSL2A2RTX5 802 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 F8VZ95 297 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 ZRANB2O95218 330 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 MOCS3O95396 460 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 EDNRBP24530 442 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PRKCEQ02156 737 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PPIL2Q13356 520 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 TREML2Q5T2D2 321 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 PLA2G4FQ68DD2 849 aa13.57□□□□□ -0.24
TRAF3IP3-213ENST00000478359 GADL1Q6ZQY3 521 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms