RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ANKEF1Q9NU02 776 aa13.05□□□□□ -0.32
SKI-202ENST00000478223 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
SKI-202ENST00000478223 PCDHB7Q9Y5E2 793 aa13.05□□□□□ -0.32
SKI-202ENST00000478223 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 PP2D1A8MPX8 630 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 C5orf67F2Z3F1 127 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 GRM6O15303 877 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 CSPG5O95196 566 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
SKI-202ENST00000478223 TFF2Q03403 129 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 CLLU1OSQ5K130 101 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 ECHDC2Q86YB7 292 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 PSPC1Q8WXF1 523 aaKnown RBP13.04□□□□□ -0.32
SKI-202ENST00000478223 SAMD11Q96NU1 681 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 JPH2Q9BR39 696 aaPredicted RBP13.04□□□□□ -0.32
SKI-202ENST00000478223 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
SKI-202ENST00000478223 TUFT1Q9NNX1 390 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 GPRC5CQ9NQ84 441 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 TMEM161AQ9NX61 479 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 ANK1P16157 1881 aa13.04□□□□□ -0.32
SKI-202ENST00000478223 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 H3BQV1 296 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 GLRA2P23416 452 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 DNAJB1P25685 340 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 RPA1P27694 616 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 CDC25AP30304 524 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 ARL2P36404 184 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 BMPR1AP36894 532 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 CAPSQ13938 189 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 LARP1BQ659C4 914 aaKnown RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 LRRC55Q6ZSA7 311 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 MAEAQ7L5Y9 396 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 ZNF598Q86UK7 904 aaKnown RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 LPPQ93052 612 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 CWH43Q9H720 699 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 ATP6V0A4Q9HBG4 840 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 LMCD1Q9NZU5 365 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
SKI-202ENST00000478223 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.03□□□□□ -0.32
SKI-202ENST00000478223 VWA8A3KMH1 1905 aa13.02□□□□□ -0.32
SKI-202ENST00000478223 MTCL1Q9Y4B5 1905 aaKnown RBP13.02□□□□□ -0.32
SKI-202ENST00000478223 DGAT1O75907 488 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 SFPQP23246 707 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 17
SKI-202ENST00000478223 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 CAMK1Q14012 370 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 TCP11Q8WWU5 503 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 MRPL38Q96DV4 380 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 MMTAG2Q9BU76 263 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 ELAC1Q9H777 363 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 AGPAT5Q9NUQ2 364 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
SKI-202ENST00000478223 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.33
SKI-202ENST00000478223 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 A0A0U1RQF3 1178 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 ITGB1P05556 798 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 XRCC6P12956 609 aaKnown RBP eCLIP13.01□□□□□ -0.33
SKI-202ENST00000478223 HOXA11P31270 313 aaPredicted RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 CCT6AP40227 531 aaKnown RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 PHKA2P46019 1235 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 PTENP60484 403 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 ATP2C1P98194 919 aaPredicted RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 RILPL1Q5EBL4 403 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 UBXN11Q5T124 520 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 HELQQ8TDG4 1101 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 BSNDQ8WZ55 320 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 CPB2Q96IY4 423 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
SKI-202ENST00000478223 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
SKI-202ENST00000478223 VPS37CA5D8V6 355 aaPredicted RBP13□□□□□ -0.33
SKI-202ENST00000478223 E9PMD0 336 aa13□□□□□ -0.33
SKI-202ENST00000478223 DLL1O00548 723 aa13□□□□□ -0.33
SKI-202ENST00000478223 EDN1P05305 212 aa13□□□□□ -0.33
SKI-202ENST00000478223 RB1P06400 928 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms