RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 ANO1Q5XXA6 986 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 MAP7D3Q8IWC1 876 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 CAMKK2Q96RR4 588 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 LRRC1Q9BTT6 524 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 ECT2Q9H8V3 914 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 SAMD15Q9P1V8 674 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 AGAP1Q9UPQ3 857 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 ECM29Q5VYK3 1845 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 SPTLC2O15270 562 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 TPBGLP0DKB5 382 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PBX1P40424 430 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 TFAP4Q01664 338 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 SLC2A7Q6PXP3 512 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 ASRGL1Q7L266 308 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 MAPKAPK5Q8IW41 473 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 SCAIQ8N9R8 606 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 DUSP9Q99956 384 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PFDN4Q9NQP4 134 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PDE2AO00408 941 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 MMP1P03956 469 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 ADARP55265 1226 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 GUCY2DQ02846 1103 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 BNIP1Q12981 228 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 CNGA3Q16281 694 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 EIF1ADQ8N9N8 165 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 TRPC4APQ8TEL6 797 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 GATA6Q92908 595 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 FAM129AQ9BZQ8 928 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 PRELID1Q9Y255 219 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
RTFDC1-207ENST00000477573 MYH6P13533 1939 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 ENC1O14682 589 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 SART1O43290 800 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 LGR5O75473 907 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 PTK7Q13308 1070 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 TRIM14Q14142 442 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 PLS1Q14651 629 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 MUM1Q2TAK8 710 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 GDF3Q9NR23 364 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
RTFDC1-207ENST00000477573 SRGAP2O75044 1071 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 MTRF1O75570 445 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 MSL3P1P0C860 447 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 TMOD1P28289 359 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 HSPA9P38646 679 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 HALP42357 657 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 PARP6Q2NL67 630 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 FAM133BQ5BKY9 247 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 ZNF333Q96JL9 665 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 XPO6Q96QU8 1125 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 FLT1P17948 1338 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 QSER1Q2KHR3 1735 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 KANSL1LA0AUZ9 987 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 NFKBIAP25963 317 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 OCRLQ01968 901 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 EVX2Q03828 476 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 DMPKQ09013 629 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 SLC39A14Q15043 492 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 LIN52Q52LA3 116 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 HAUS3Q68CZ6 603 aa13.62□□□□□ -0.23
RTFDC1-207ENST00000477573 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms