RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 AMPD3Q01432 767 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 RHPN2Q8IUC4 686 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 DAW1Q8N136 415 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 PAGE5Q96GU1 130 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 NLRP4Q96MN2 994 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 TRIM9Q9C026 710 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 TRPV2Q9Y5S1 764 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 MICAL3Q7RTP6 2002 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 TET1Q8NFU7 2136 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 MBD3O95983 291 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 PRR29P0C7W0 189 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 CKBP12277 381 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 IDEP14735 1019 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 ARL2P36404 184 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 GPC3P51654 580 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 KIZQ2M2Z5 673 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 SH3RF1Q7Z6J0 888 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 BSNDQ8WZ55 320 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 ZNF668Q96K58 619 aaPredicted RBP16.96■□□□□ 0.3
SEC13-215ENST00000477547 TIGD1Q96MW7 591 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 BLZF1Q9H2G9 400 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 POLD4Q9HCU8 107 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 PRKAG2Q9UGJ0 569 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 GINS2Q9Y248 185 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 CDY2AQ9Y6F7 541 aa16.96■□□□□ 0.3
SEC13-215ENST00000477547 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
SEC13-215ENST00000477547 SELPP16109 830 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 GLRA2P23416 452 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 CASP1P29466 404 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
SEC13-215ENST00000477547 MGAT3Q09327 533 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 LAMTOR4Q0VGL1 99 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 DMP1Q13316 513 aaPredicted RBP16.95■□□□□ 0.3
SEC13-215ENST00000477547 CAPSQ13938 189 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 GIT2Q14161 759 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 TFDP1Q14186 410 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 MXD4Q14582 209 aaPredicted RBP16.95■□□□□ 0.3
SEC13-215ENST00000477547 POSTNQ15063 836 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 PPP2R5AQ15172 486 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 SHHQ15465 462 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 KANK3Q6NY19 840 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 NME8Q8N427 588 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 GPT2Q8TD30 523 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 PRPF31Q8WWY3 499 aaKnown RBP16.95■□□□□ 0.3
SEC13-215ENST00000477547 NLRP7Q8WX94 980 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 DNAJC19Q96DA6 116 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
SEC13-215ENST00000477547 CDH23Q9H251 3354 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 LRRIQ4A6NIV6 560 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 MYL1P05976 194 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 RAG1P15918 1043 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 PTMSP20962 102 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 CYP2C18P33260 490 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 CUL4BQ13620 913 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 ZNF410Q86VK4 478 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 SFR1Q86XK3 245 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 RNF149Q8NC42 400 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
SEC13-215ENST00000477547 OSMRQ99650 979 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 TTYH1Q9H313 450 aaPredicted RBP16.94■□□□□ 0.3
SEC13-215ENST00000477547 PARVGQ9HBI0 331 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 RAPGEFL1Q9UHV5 662 aa16.94■□□□□ 0.3
SEC13-215ENST00000477547 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
SEC13-215ENST00000477547 A0A087WZ62 844 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 ASAP2O43150 1006 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 PLS3P13797 630 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 COL9A1P20849 921 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 NAMPTP43490 491 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 PHKA2P46019 1235 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 ZNF131P52739 623 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 CCL23P55773 120 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 PEX3P56589 373 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 COASYQ13057 564 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 PNOCQ13519 176 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 ODR4Q5SWX8 454 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 TRAF7Q6Q0C0 670 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 CCDC65Q8IXS2 484 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 FDXACB1Q9BRP7 624 aaPredicted RBP16.93■□□□□ 0.3
SEC13-215ENST00000477547 KIFC3Q9BVG8 833 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 CELF4Q9BZC1 486 aaKnown RBP16.93■□□□□ 0.3
SEC13-215ENST00000477547 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 PANK4Q9NVE7 773 aa16.93■□□□□ 0.3
SEC13-215ENST00000477547 LARSQ9P2J5 1176 aaKnown RBP16.93■□□□□ 0.3
SEC13-215ENST00000477547 ADGRA3Q8IWK6 1321 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 FRMD3A2A2Y4 597 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms