RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 ZBTB39O15060 712 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 RB1P06400 928 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 RAB27AP51159 221 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 PTENP60484 403 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 GRIN2CQ14957 1233 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 CLP1Q92989 425 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 MMTAG2Q9BU76 263 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 KIAA1024Q9UPX6 916 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 EVPLQ92817 2033 aa13.73□□□□□ -0.21
CLCNKA-205ENST00000477360 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 CHD9Q3L8U1 2897 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 ZNF623O75123 536 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 PTPAQ15257 358 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 KCNN1Q92952 543 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 TMEM143Q96AN5 459 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 NLRP4Q96MN2 994 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 ZNF396Q96N95 335 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 DDX19AQ9NUU7 478 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-205ENST00000477360 C5orf67F2Z3F1 127 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 MGEA5O60502 916 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 MYOGP15173 224 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 UBA7P41226 1012 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 NAMPTP43490 491 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 SLC39A14Q15043 492 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 FAM187BQ17R55 369 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 CDCA2Q69YH5 1023 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 CATSPER4Q7RTX7 472 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 CALML4Q96GE6 196 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 LRFN2Q9ULH4 789 aa13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-205ENST00000477360 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.22
CLCNKA-205ENST00000477360 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 USO1O60763 962 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 YEATS4O95619 227 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 FOSL2P15408 326 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 GLRA2P23416 452 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 EFNA5P52803 228 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 CAPSQ13938 189 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 ECM1Q16610 540 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 TMEM119Q4V9L6 283 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 ECHDC2Q86YB7 292 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 KSR1Q8IVT5 923 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 P2RX5Q93086 422 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 CDK5RAP3Q96JB5 506 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 POLR3FQ9H1D9 316 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-205ENST00000477360 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 TCHHQ07283 1943 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 PTPRSQ13332 1948 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 LOXHD1Q8IVV2 1947 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 PPP6R2O75170 966 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 ERLIN2O94905 339 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 UPP2O95045 317 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 BRD1O95696 1058 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 ABCD1P33897 745 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 BTG3Q14201 252 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 C1orf186Q6ZWK4 172 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 MRPL10Q7Z7H8 261 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 CABP7Q86V35 215 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 ASAP3Q8TDY4 903 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
CLCNKA-205ENST00000477360 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms