RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 STAG3L1P0CL83 205 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 PPFIA1Q13136 1202 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 MTMR1Q13613 665 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 NAALADL2Q58DX5 795 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.08
BRCA1-214ENST00000477152 IL31RAQ8NI17 732 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 MAP4K1Q92918 833 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 SDF4Q9BRK5 362 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 SETD4Q9NVD3 440 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 RBM28Q9NW13 759 aaKnown RBP8.29□□□□□ -1.08
BRCA1-214ENST00000477152 TCEAL9Q9UHQ7 104 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 BAZ2BQ9UIF8 2168 aaKnown RBP8.29□□□□□ -1.08
BRCA1-214ENST00000477152 A6NHS1 94 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 hCG_1984214I3L0E3 225 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PRC1O43663 620 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 CYTH3O43739 400 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 FOSP01100 380 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 CTSHP09668 335 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 KCNA5P22460 613 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 TCF7P36402 384 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 LIFRP42702 1097 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 MRPS9P82933 396 aaKnown RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PKDCCQ504Y2 493 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 KRT40Q6A162 431 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 MCTP2Q6DN12 878 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 GJD3Q8N144 294 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 ZNF713Q8N859 430 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 GPR152Q8TDT2 470 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 IGDCC4Q8TDY8 1250 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 EDEM1Q92611 657 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PABPC5Q96DU9 382 aaKnown RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 NECAB3Q96P71 396 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 C17orf80Q9BSJ5 609 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 TUBE1Q9UJT0 475 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 A0A0C4DFX4 3053 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PI4K2BG5E9Z4 385 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 NDUFB5O43674 189 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 CTNNB1P35222 781 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 SLC26A2P50443 739 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 SP4Q02446 784 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 PTH1RQ03431 593 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 MB21D2Q8IYB1 491 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 RGL4Q8IZJ4 473 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 NME8Q8N427 588 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 LMBR1Q8WVP7 490 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
BRCA1-214ENST00000477152 RBM8AQ9Y5S9 174 aaKnown RBP8.28□□□□□ -1.08
BRCA1-214ENST00000477152 DOCK5Q9H7D0 1870 aa8.27□□□□□ -1.08
BRCA1-214ENST00000477152 UNC80Q8N2C7 3258 aa8.27□□□□□ -1.08
BRCA1-214ENST00000477152 GPR182O15218 404 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 P4HBP07237 508 aaKnown RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 GSPT1P15170 499 aaKnown RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 BTG3Q14201 252 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 GRIK4Q16099 956 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 ARSJQ5FYB0 599 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 FAM160B1Q5W0V3 765 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 USP17L6PQ6QN14 398 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 TSHZ1Q6ZSZ6 1077 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 WNT8BQ93098 351 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 LRFN3Q9BTN0 628 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 KCNH6Q9H252 994 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 LY9Q9HBG7 655 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 AAASQ9NRG9 546 aa8.27□□□□□ -1.09
BRCA1-214ENST00000477152 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
BRCA1-214ENST00000477152 NCOR1O75376 2440 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 C5orf67F2Z3F1 127 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 MEIS2O14770 477 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 AXIN1O15169 862 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 ZNF76P36508 570 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 BMPR1AP36894 532 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 FANCBQ8NB91 859 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 EPHX3Q9H6B9 360 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-214ENST00000477152 TIMMDC1Q9NPL8 285 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 RNF19AQ9NV58 838 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 SLC9A2Q9UBY0 812 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 PCDHA8Q9Y5H6 950 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 ADGRA3Q8IWK6 1321 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 TTC28Q96AY4 2481 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 CCDC196A0A1B0GTZ2 297 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 SH2B2O14492 632 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-214ENST00000477152 MICAL2O94851 1124 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 SRGAP2BP0DMP2 458 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 GHRP10912 638 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 MSX1P28360 303 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms