RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 POLD4Q9HCU8 107 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 RBM12Q9NTZ6 932 aaKnown RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 MAP3K20Q9NYL2 800 aaKnown RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 SCN4AP35499 1836 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 MYH11P35749 1972 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 RNF40O75150 1001 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 CCDC172P0C7W6 258 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 MAPTP10636 758 aaKnown RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 DSG3P32926 999 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 NNTQ13423 1086 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ALCAMQ13740 583 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 RPS6KA1Q15418 735 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ZC2HC1CQ53FD0 456 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 CATSPERGQ6ZRH7 1159 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 REPS2Q8NFH8 660 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 LXNQ9BS40 222 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 TMOD4Q9NZQ9 345 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ZBTB39O15060 712 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 H2AFZP0C0S5 128 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 FMO5P49326 533 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 NPEPPSP55786 919 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 GHRHRQ02643 423 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 H2AFVQ71UI9 128 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 CAVIN3Q969G5 261 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 CLMNQ96JQ2 1002 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
TMEM53-208ENST00000476724 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 STK33Q9BYT3 514 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 AGPAT3Q9NRZ7 376 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 RPTORQ8N122 1335 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 GOLGA6BA6NDN3 693 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 P4HBP07237 508 aaKnown RBP17.91■□□□□ 0.46
TMEM53-208ENST00000476724 ACTN2P35609 894 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 SND1Q7KZF4 910 aaKnown RBP eCLIP17.91■□□□□ 0.46
TMEM53-208ENST00000476724 TMEM174Q8WUU8 243 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 MS4A14Q96JA4 679 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 TAF1DQ9H5J8 278 aaPredicted RBP17.91■□□□□ 0.46
TMEM53-208ENST00000476724 ELP3Q9H9T3 547 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 EHD2Q9NZN4 543 aa17.91■□□□□ 0.46
TMEM53-208ENST00000476724 WRAP73Q9P2S5 460 aaPredicted RBP17.91■□□□□ 0.46
TMEM53-208ENST00000476724 PHACTR2O75167 634 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 PPP1R37O75864 691 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 SOX5P35711 763 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 NOP2P46087 812 aaKnown RBP17.9■□□□□ 0.46
TMEM53-208ENST00000476724 HNRNPH2P55795 449 aaKnown RBP17.9■□□□□ 0.46
TMEM53-208ENST00000476724 SLC7A5Q01650 507 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 COG2Q14746 738 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 TREML2Q5T2D2 321 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 ALS2CLQ60I27 953 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 LEKR1Q6ZMV7 388 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 MIER3Q7Z3K6 550 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 GSPT2Q8IYD1 628 aaKnown RBP17.9■□□□□ 0.46
TMEM53-208ENST00000476724 SYCE1Q8N0S2 351 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 IL31RAQ8NI17 732 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
TMEM53-208ENST00000476724 FAM204AQ9H8W3 233 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 GDF3Q9NR23 364 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 SMARCAL1Q9NZC9 954 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 LARSQ9P2J5 1176 aaKnown RBP17.9■□□□□ 0.46
TMEM53-208ENST00000476724 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 CSADQ9Y600 493 aa17.9■□□□□ 0.46
TMEM53-208ENST00000476724 KIF4AO95239 1232 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 CAPN2P17655 700 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 RFX1P22670 979 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 GGCXP38435 758 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 RPS6P62753 249 aaKnown RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 TNNC1P63316 161 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 AFAP1L1Q8TED9 768 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 ZC3H15Q8WU90 426 aaKnown RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 VTI1AQ96AJ9 217 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 TMEM206Q9H813 350 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 DBR1Q9UK59 544 aaKnown RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 PNMA2Q9UL42 364 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 AGPSO00116 658 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 OPA1O60313 960 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 RPS6KA5O75582 802 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 ITGB5P18084 799 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 IREB2P48200 963 aaKnown RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 TMEM132BQ14DG7 1078 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 PADI6Q6TGC4 694 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 SYCP3Q8IZU3 236 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 LRRC57Q8N9N7 239 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 USP38Q8NB14 1042 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 ACTRT1Q8TDG2 376 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 GDAP1L1Q96MZ0 367 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 TAAR1Q96RJ0 339 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 KCNH7Q9NS40 1196 aa17.89■□□□□ 0.45
TMEM53-208ENST00000476724 CWC15Q9P013 229 aaKnown RBP17.89■□□□□ 0.45
TMEM53-208ENST00000476724 SPDYE16A6NNV3 312 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-208ENST00000476724 HIP1RO75146 1068 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 FDX1P10109 184 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 MAPK7Q13164 816 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms