RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 COL6A3P12111 3177 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ARHGEF35A5YM69 484 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 EPOPA6NHQ4 379 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 USO1O60763 962 aaKnown RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 CYP11B2P19099 503 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 SFPQP23246 707 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 HYIQ5T013 277 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 PADI6Q6TGC4 694 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 IFNLR1Q8IU57 520 aaPredicted RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 RNF149Q8NC42 400 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 MCPH1Q8NEM0 835 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ZSCAN16Q9H4T2 348 aaPredicted RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ELAC1Q9H777 363 aaKnown RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 DDX19AQ9NUU7 478 aaKnown RBP18.03■□□□□ 0.48
SCN5A-212ENST00000476683 PCDHB7Q9Y5E2 793 aa18.03■□□□□ 0.48
SCN5A-212ENST00000476683 ADGRA3Q8IWK6 1321 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 RFXAPO00287 272 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 LINC00271P0C7V0 271 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 PDIA4P13667 645 aaKnown RBP18.02■□□□□ 0.48
SCN5A-212ENST00000476683 POU3F3P20264 500 aaPredicted RBP18.02■□□□□ 0.48
SCN5A-212ENST00000476683 GLRA2P23416 452 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 PTENP60484 403 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 FIBCD1Q8N539 461 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 AK8Q96MA6 479 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 SAMD11Q96NU1 681 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 C17orf80Q9BSJ5 609 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 BHMT2Q9H2M3 363 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 MINDY3Q9H8M7 445 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 TMEM161AQ9NX61 479 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 DNM3Q9UQ16 869 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 CLIC4Q9Y696 253 aa18.02■□□□□ 0.48
SCN5A-212ENST00000476683 A0A0U1RQF3 1178 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 LPXNO60711 386 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 EYA4O95677 639 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 HSP90AA1P07900 732 aaKnown RBP18.01■□□□□ 0.47
SCN5A-212ENST00000476683 PHKA2P46019 1235 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 CAPSQ13938 189 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 TFDP1Q14186 410 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 BTG3Q14201 252 aaPredicted RBP18.01■□□□□ 0.47
SCN5A-212ENST00000476683 PTPAQ15257 358 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 CATSPER4Q7RTX7 472 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 CMTR2Q8IYT2 770 aaKnown RBP18.01■□□□□ 0.47
SCN5A-212ENST00000476683 CLP1Q92989 425 aaKnown RBP18.01■□□□□ 0.47
SCN5A-212ENST00000476683 NFKBIZQ9BYH8 718 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 POLR3FQ9H1D9 316 aaPredicted RBP18.01■□□□□ 0.47
SCN5A-212ENST00000476683 GPRC5CQ9NQ84 441 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 DACT1Q9NYF0 836 aa18.01■□□□□ 0.47
SCN5A-212ENST00000476683 E9PMD0 336 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 SLC26A4O43511 780 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 PCBP1Q15365 356 aaKnown RBP eCLIP18■□□□□ 0.47
SCN5A-212ENST00000476683 MAEAQ7L5Y9 396 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 KCNK18Q7Z418 384 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 ECHDC2Q86YB7 292 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 MAFAQ8NHW3 353 aaPredicted RBP18■□□□□ 0.47
SCN5A-212ENST00000476683 PNMA5Q96PV4 448 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 AGPAT5Q9NUQ2 364 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 MTUS1Q9ULD2 1270 aa18■□□□□ 0.47
SCN5A-212ENST00000476683 EOMESO95936 686 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 IGFBP4P22692 258 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
SCN5A-212ENST00000476683 LONP1P36776 959 aaKnown RBP17.99■□□□□ 0.47
SCN5A-212ENST00000476683 GATMP50440 423 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 GRB10Q13322 594 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 EPC2Q52LR7 807 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 FAM102BQ5T8I3 360 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 ZNF598Q86UK7 904 aaKnown RBP17.99■□□□□ 0.47
SCN5A-212ENST00000476683 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
SCN5A-212ENST00000476683 PIN4Q9Y237 131 aaKnown RBP17.99■□□□□ 0.47
SCN5A-212ENST00000476683 MORC2Q9Y6X9 1032 aaPredicted RBP17.99■□□□□ 0.47
SCN5A-212ENST00000476683 C5orf67F2Z3F1 127 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 IBSPP21815 317 aaPredicted RBP17.98■□□□□ 0.47
SCN5A-212ENST00000476683 BMPR1AP36894 532 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 GRIN1Q05586 938 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 CABP7Q86V35 215 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 USP28Q96RU2 1077 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 RNF19AQ9NV58 838 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 RWDD3Q9Y3V2 267 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
SCN5A-212ENST00000476683 MTCH2Q9Y6C9 303 aa17.98■□□□□ 0.47
SCN5A-212ENST00000476683 INO80B-WBP1J3KQ70 363 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 HOXA2O43364 376 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 ZNF623O75123 536 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 RB1P06400 928 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 FGFR1P11362 822 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 SKIP12755 728 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
SCN5A-212ENST00000476683 UBA7P41226 1012 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 MBTD1Q05BQ5 628 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 SLC39A14Q15043 492 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 ZRSR1Q15695 479 aaKnown RBP17.97■□□□□ 0.47
SCN5A-212ENST00000476683 AMHR2Q16671 573 aa17.97■□□□□ 0.47
SCN5A-212ENST00000476683 TMEM119Q4V9L6 283 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms