RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 SPIRE2Q8WWL2 714 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.25
MRPL55-227ENST00000475832 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
MRPL55-227ENST00000475832 SEMA6BQ9H3T3 888 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 ST6GALNAC4Q9H4F1 302 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 KMT5AQ9NQR1 393 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
MRPL55-227ENST00000475832 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
MRPL55-227ENST00000475832 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 EVI5O60447 810 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 MAFO75444 373 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 PRPF6O94906 941 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 SGPL1O95470 568 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 MMP3P08254 477 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 ZNF865P0CJ78 1059 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 PRAMEF19Q5SWL8 479 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 IER5Q5VY09 327 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 UBE2Q1Q7Z7E8 422 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 DAW1Q8N136 415 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 MED15Q96RN5 788 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 DUSP9Q99956 384 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 HSD3B7Q9H2F3 369 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 DHX33Q9H6R0 707 aaKnown RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-227ENST00000475832 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 COL1A2P08123 1366 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 KIAA1217Q5T5P2 1943 aa13.45□□□□□ -0.26
MRPL55-227ENST00000475832 PLXNA1Q9UIW2 1896 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 H3BRB1 525 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 N4BP3O15049 544 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 MAGEB2O15479 319 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 AP5Z1O43299 807 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 ZEB2O60315 1214 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 KPNA6O60684 536 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 PMS1P54277 932 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 NCKAP1LP55160 1127 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 STRN3Q13033 797 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 ADAM9Q13443 819 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 MXD4Q14582 209 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 GJC2Q5T442 439 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 DEPTORQ8TB45 409 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 CNOT6LQ96LI5 555 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 KATNAL1Q9BW62 490 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 GBP3Q9H0R5 595 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 KCTD10Q9H3F6 313 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 TUT1Q9H6E5 874 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 POLD4Q9HCU8 107 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 PDLIM7Q9NR12 457 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 MTMR10Q9NXD2 777 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 IMPACTQ9P2X3 320 aa13.44□□□□□ -0.26
MRPL55-227ENST00000475832 ZNFX1Q9P2E3 1918 aaKnown RBP13.44□□□□□ -0.26
MRPL55-227ENST00000475832 A6NJR5 290 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 SLC16A4O15374 487 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 ASAP2O43150 1006 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 NRDCO43847 1150 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 DUSP11O75319 330 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 TPM1P09493 284 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 HOXD8P13378 290 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 TMOD1P28289 359 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 CNGA1P29973 690 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 NAMPTP43490 491 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 NPTX2P47972 431 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 CASP5P51878 434 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 GSDMDP57764 484 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 TFDP1Q14186 410 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 MYBPC2Q14324 1141 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 KRT31Q15323 416 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 TRIM50Q86XT4 487 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 SPC24Q8NBT2 197 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 GLIS3Q8NEA6 775 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 PSPC1Q8WXF1 523 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 NTPCRQ9BSD7 190 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
MRPL55-227ENST00000475832 METTL14Q9HCE5 456 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms