RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 ITGA1P56199 1179 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 TPM4P67936 248 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 TAF7LQ5H9L4 462 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 CREB3L3Q68CJ9 461 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 RUFY4Q6ZNE9 571 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 SPRED1Q7Z699 444 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 ARHGEF25Q86VW2 580 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 TICAM2Q86XR7 235 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 UNC5CLQ8IV45 518 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 ZFPM1Q8IX07 1006 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 IFNL2Q8IZJ0 200 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 LRRC59Q96AG4 307 aaKnown RBP4.87□□□□□ -1.63
RBM39-229ENST00000475651 TMEM209Q96SK2 561 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 MYD88Q99836 296 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 CCDC8Q9H0W5 538 aaPredicted RBP4.87□□□□□ -1.63
RBM39-229ENST00000475651 SIL1Q9H173 461 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 NUP62CLQ9H1M0 184 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 PDCL3Q9H2J4 239 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 TNMDQ9H2S6 317 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 BOLA2Q9H3K6 86 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 ZSCAN16Q9H4T2 348 aaPredicted RBP4.87□□□□□ -1.63
RBM39-229ENST00000475651 DDX19AQ9NUU7 478 aaKnown RBP4.87□□□□□ -1.63
RBM39-229ENST00000475651 CNPY2Q9Y2B0 182 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 ZDHHC9Q9Y397 364 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 CEMIPQ8WUJ3 1361 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 OVOS2A0A0G2JMS6 1433 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 ARHGAP23Q9P227 1491 aa4.87□□□□□ -1.63
RBM39-229ENST00000475651 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
RBM39-229ENST00000475651 SETD1AO15047 1707 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 UBR1Q8IWV7 1749 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 UQCRHLA0A096LP55 91 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 DYNC1I1O14576 645 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 SLC27A2O14975 620 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 CTAGE5O15320 804 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 KCNQ3O43525 872 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 DHX16O60231 1041 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 KCNH1O95259 989 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 ADCY5O95622 1261 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 ANXA1P04083 346 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 UQCRHP07919 91 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 PLS3P13797 630 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 PPP2CBP62714 309 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 PPP2CAP67775 309 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 SCRN1Q12765 414 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 MCMDC2Q4G0Z9 681 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 CCDC73Q6ZRK6 1079 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 RIOX2Q8IUF8 465 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 TOE1Q96GM8 510 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 SUCLG2Q96I99 432 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 PDLIM2Q96JY6 352 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 DNAJC2Q99543 621 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 MENTQ9BUN1 341 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 NAT10Q9H0A0 1025 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 BICC1Q9H694 974 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 CTNNA3Q9UI47 895 aa4.86□□□□□ -1.63
RBM39-229ENST00000475651 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 TIMM13Q9Y5L4 95 aaPredicted RBP4.86□□□□□ -1.63
RBM39-229ENST00000475651 BECN2A8MW95 431 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ATP5JP18859 108 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 RPS6KB1P23443 525 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZC3H6P61129 1189 aaKnown RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 PTH1RQ03431 593 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 STK3Q13188 491 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 GCKRQ14397 625 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 DHX8Q14562 1220 aaKnown RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZNF568Q3ZCX4 644 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 CCDC158Q5M9N0 1113 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 E4F1Q66K89 784 aaPredicted RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 SLFN13Q68D06 897 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ATL3Q6DD88 541 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZNF585AQ6P3V2 769 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZNF790Q6PG37 636 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 CPLX2Q6PUV4 134 aaKnown RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 CRIP3Q6Q6R5 217 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 VHLLQ6RSH7 139 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 COPS6Q7L5N1 327 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 STK32CQ86UX6 486 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 TEX2Q8IWB9 1127 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 PALM2Q8IXS6 379 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZNF654Q8IZM8 581 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 NECAB1Q8N987 351 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 BVESQ8NE79 360 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 PLEKHO2Q8TD55 490 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 UBE2Q2Q8WVN8 375 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 MAP4K1Q92918 833 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 TTC14Q96N46 770 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 NEUROD6Q96NK8 337 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 NEK1Q96PY6 1258 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 LLPHQ9BRT6 129 aaKnown RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 MCMBPQ9BTE3 642 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ZNF341Q9BYN7 854 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 ALDH8A1Q9H2A2 487 aaPredicted RBP4.85□□□□□ -1.63
RBM39-229ENST00000475651 SLC52A2Q9HAB3 445 aa4.85□□□□□ -1.63
RBM39-229ENST00000475651 USP25Q9UHP3 1055 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms