RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 USP17L19D6RCP7 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L20D6RJB6 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L24Q0WX57 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 CAPRIN1Q14444 709 aaKnown RBP18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 NKX1-1Q15270 411 aaPredicted RBP18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L6PQ6QN14 398 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 CYB5R4Q7L1T6 521 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 KIFC3Q9BVG8 833 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 KIAA1586Q9HCI6 787 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 ELF1P32519 619 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 PCSK1NQ9UHG2 260 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 ADGRG1Q9Y653 693 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 SLC16A4O15374 487 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 CIITAP33076 1130 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 OCA2Q04671 838 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 DCAF4Q8WV16 495 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 SNX19Q92543 992 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 TMEM247A6NEH6 219 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 H7C1W4 665 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 EPC1Q9H2F5 836 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 ZCCHC17Q9NP64 241 aaKnown RBP18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 UBE4BO95155 1302 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 SYCE1LA8MT33 242 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 NT5C2P49902 561 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 MAPK6Q16659 721 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 ZNF746Q6NUN9 644 aaPredicted RBP18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 DIAPH2O60879 1101 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 KRT33BQ14525 404 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 TGS1Q96RS0 853 aaKnown RBP18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 MTRQ99707 1265 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.9■□□□□ 0.624e-8■■□□□ 13
LPCAT1-202ENST00000475622 STRIP2Q9ULQ0 834 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 RNF103-CHMP3A0A140T963 221 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 ARFIP2P53365 341 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 ZC3H15Q8WU90 426 aaKnown RBP18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 TTC26A0AVF1 554 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 POTEB3A0JP26 581 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 USP27XA6NNY8 438 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 POTECB2RU33 542 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 TEX33O43247 280 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 CACNB3P54284 484 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 POTEBQ6S5H4 581 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 NLRP14Q86W24 1093 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 CYP26B1Q9NR63 512 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 TRIM33Q9UPN9 1127 aa18.9■□□□□ 0.62
LPCAT1-202ENST00000475622 ACTN3Q08043 901 aaPredicted RBP18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 DRAP1Q14919 205 aaPredicted RBP18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 LRRC14Q15048 493 aa18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 KNOP1Q1ED39 458 aaKnown RBP18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 RMDN3Q96TC7 470 aa18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 SUFUQ9UMX1 484 aa18.89■□□□□ 0.62
LPCAT1-202ENST00000475622 CHRNA3P32297 505 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 IFNA8P32881 189 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 POU5F1BQ06416 359 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 NAA30Q147X3 362 aaPredicted RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 SZRD1Q7Z422 152 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 NDUFAF2Q8N183 169 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 YIPF3Q9GZM5 350 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 COA1Q9GZY4 146 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 DONSONQ9NYP3 566 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 ANP32DO95626 131 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 FTLP02792 175 aaPredicted RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 GPS1Q13098 491 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 CALR3Q96L12 384 aaKnown RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 TAF1DQ9H5J8 278 aaPredicted RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 ETNK1Q9HBU6 452 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 CHGBP05060 677 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 TXNRD1Q16881 649 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 GRAMD4Q6IC98 578 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 NBPF10Q6P3W6 841 aaKnown RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 F5H423 210 aaPredicted RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 PDIA2Q13087 525 aaKnown RBP18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 SNX5Q9Y5X3 404 aa18.89■□□□□ 0.61
LPCAT1-202ENST00000475622 GRID2IPA4D2P6 1211 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ASNSP08243 561 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 SDC4P31431 198 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ICE2Q659A1 982 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 PDCD6IPQ8WUM4 868 aaKnown RBP18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 SAAL1Q96ER3 474 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 LCMT1Q9UIC8 334 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ATICP31939 592 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ZNF568Q3ZCX4 644 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 SPATA17Q96L03 361 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM167BQ9BTA0 163 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ADA2Q9NZK5 511 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 CREB3O43889 395 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 NMT2O60551 498 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 HADHAP40939 763 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 VAMP7P51809 220 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ZBED8Q8IZ13 594 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 INTS2Q9H0H0 1204 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms