RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 COPB2P35606 906 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
FXR1-211ENST00000475315 MCL1Q07820 350 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 MAPK7Q13164 816 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 LSAMPQ13449 338 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 MYLK4Q86YV6 388 aaPredicted RBP12.68□□□□□ -0.38
FXR1-211ENST00000475315 SYCE1Q8N0S2 351 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 PROM2Q8N271 834 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 LRRC8CQ8TDW0 803 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 MLXIPLQ9NP71 852 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 PCDHA4Q9UN74 947 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 RTCBQ9Y3I0 505 aaKnown RBP12.68□□□□□ -0.38
FXR1-211ENST00000475315 COL4A3BPQ9Y5P4 624 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
FXR1-211ENST00000475315 PFASO15067 1338 aa12.68□□□□□ -0.38
FXR1-211ENST00000475315 MYMKA6NI61 221 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 TAC1P20366 129 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 ABCD1P33897 745 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 KHDC1Q4VXA5 237 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 ALKBH5Q6P6C2 394 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 VSIG1Q86XK7 387 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 GDAP1Q8TB36 358 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SCG3Q8WXD2 468 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 GBP5Q96PP8 586 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SLX1AQ9BQ83 275 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SPATA16Q9BXB7 569 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 PITPNM2Q9BZ72 1349 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SFSWAPQ12872 951 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 TRIM59Q8IWR1 403 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 MIPOL1Q8TD10 442 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.38
FXR1-211ENST00000475315 TBC1D30Q9Y2I9 924 aa12.67□□□□□ -0.38
FXR1-211ENST00000475315 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
FXR1-211ENST00000475315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
FXR1-211ENST00000475315 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 ATP6V1G1O75348 118 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 PDE8BO95263 885 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 GCP02774 474 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 FOXN2P32314 431 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 LONRF1Q17RB8 773 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 INF2Q27J81 1249 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 ANKRD42Q8N9B4 389 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
FXR1-211ENST00000475315 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 TCP11L1Q9NUJ3 509 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 AMFRQ9UKV5 643 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 PCDHA6Q9UN73 950 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 PCDHA8Q9Y5H6 950 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 SPATA31D3P0C874 917 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 PRKCIP41743 596 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
FXR1-211ENST00000475315 MOGSQ13724 837 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 GSTA3Q16772 222 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 SPATA31D4Q6ZUB0 917 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 CARD9Q9H257 536 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 INTUQ9ULD6 942 aa12.66□□□□□ -0.38
FXR1-211ENST00000475315 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
FXR1-211ENST00000475315 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 GNA14O95837 355 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 ALAS1P13196 640 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
FXR1-211ENST00000475315 FKBP3Q00688 224 aaKnown RBP12.65□□□□□ -0.38
FXR1-211ENST00000475315 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 SPDYAQ5MJ70 313 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 ZC3H18Q86VM9 953 aaKnown RBP12.65□□□□□ -0.38
FXR1-211ENST00000475315 TSG101Q99816 390 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 CCDC28BQ9BUN5 200 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
FXR1-211ENST00000475315 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 MTRF1LQ9UGC7 380 aaKnown RBP12.65□□□□□ -0.38
FXR1-211ENST00000475315 RASAL2Q9UJF2 1139 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 STARD13Q9Y3M8 1113 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 USH1CQ9Y6N9 552 aa12.65□□□□□ -0.38
FXR1-211ENST00000475315 POTEFA5A3E0 1075 aa12.65□□□□□ -0.39
FXR1-211ENST00000475315 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.39
FXR1-211ENST00000475315 FGRP09769 529 aa12.65□□□□□ -0.39
FXR1-211ENST00000475315 H2AFZP0C0S5 128 aa12.65□□□□□ -0.39
FXR1-211ENST00000475315 POTEIP0CG38 1075 aa12.65□□□□□ -0.39
FXR1-211ENST00000475315 POTEJP0CG39 1038 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms