RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 GOLGA8AA7E2F4 631 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 GOLGA8BA8MQT2 603 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 OATP04181 439 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 ASGR2P07307 311 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 CTSAP10619 480 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 DARSP14868 501 aaKnown RBP14.23□□□□□ -0.13
SKA3-206ENST00000475251 GPC3P51654 580 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 RCAN1P53805 252 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 FUT2Q10981 343 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 OTOP3Q7RTS5 596 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 DDX53Q86TM3 631 aaKnown RBP14.23□□□□□ -0.13
SKA3-206ENST00000475251 CABP7Q86V35 215 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 REXO1Q8N1G1 1221 aaKnown RBP14.23□□□□□ -0.13
SKA3-206ENST00000475251 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 NLRP7Q8WX94 980 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 CRYGNQ8WXF5 182 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 GCOM2Q9BZD3 368 aaPredicted RBP14.23□□□□□ -0.13
SKA3-206ENST00000475251 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 C6orf50Q9HD87 102 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 CDH22Q9UJ99 828 aa14.23□□□□□ -0.13
SKA3-206ENST00000475251 ZFHX2Q9C0A1 2572 aaPredicted RBP14.22□□□□□ -0.13
SKA3-206ENST00000475251 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
SKA3-206ENST00000475251 SFPQP23246 707 aaKnown RBP eCLIP14.22□□□□□ -0.13
SKA3-206ENST00000475251 GNA11P29992 359 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 SFNP31947 248 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 PFKFB3Q16875 520 aaPredicted RBP14.22□□□□□ -0.13
SKA3-206ENST00000475251 CCDC149Q6ZUS6 474 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 FLCNQ8NFG4 579 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 RTP3Q9BQQ7 232 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 TRAIPQ9BWF2 469 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 INO80BQ9C086 356 aaPredicted RBP14.22□□□□□ -0.13
SKA3-206ENST00000475251 ANO2Q9NQ90 1003 aa14.22□□□□□ -0.13
SKA3-206ENST00000475251 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
SKA3-206ENST00000475251 NT5C1B-RDH14C9J2C7 533 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 WEE2P0C1S8 567 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 AOC1P19801 751 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 ID4P47928 161 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 DNM2P50570 870 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 RAB27AP51159 221 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 PRKCEQ02156 737 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 TDGQ13569 410 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 PRR16Q569H4 304 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 ELMSAN1Q6PJG2 1045 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 GLB1LQ6UWU2 654 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 DHX32Q7L7V1 743 aaKnown RBP14.21□□□□□ -0.13
SKA3-206ENST00000475251 FRMD5Q7Z6J6 570 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
SKA3-206ENST00000475251 BICD2Q8TD16 824 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 IGSF21Q96ID5 467 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 ESYT1Q9BSJ8 1104 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 EMILIN2Q9BXX0 1053 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 ZMYND12Q9H0C1 365 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 SMOC2Q9H3U7 446 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 DISC1Q9NRI5 854 aa14.21□□□□□ -0.13
SKA3-206ENST00000475251 MYO10Q9HD67 2058 aa14.21□□□□□ -0.14
SKA3-206ENST00000475251 EPCAMP16422 314 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 CIITAP33076 1130 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 PHKA2P46019 1235 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 JAK3P52333 1124 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 RNASELQ05823 741 aaKnown RBP14.2□□□□□ -0.14
SKA3-206ENST00000475251 COL9A3Q14050 684 aaPredicted RBP14.2□□□□□ -0.14
SKA3-206ENST00000475251 TWF2Q6IBS0 349 aaKnown RBP14.2□□□□□ -0.14
SKA3-206ENST00000475251 TMC5Q6UXY8 1006 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 GPR149Q86SP6 731 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 CCDC105Q8IYK2 499 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 ADSSL1Q8N142 457 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 RIT2Q99578 217 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 SEMA4AQ9H3S1 761 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 DPP7Q9UHL4 492 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 FBXL21Q9UKT6 434 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 DUSP12Q9UNI6 340 aa14.2□□□□□ -0.14
SKA3-206ENST00000475251 DENND4AQ7Z401 1863 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
SKA3-206ENST00000475251 FGD1P98174 961 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 EXOSC10Q01780 885 aaKnown RBP14.19□□□□□ -0.14
SKA3-206ENST00000475251 KRT32Q14532 448 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 NONOQ15233 471 aaKnown RBP eCLIP14.19□□□□□ -0.14
SKA3-206ENST00000475251 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 CWF19L1Q69YN2 538 aaKnown RBP14.19□□□□□ -0.14
SKA3-206ENST00000475251 C15orf39Q6ZRI6 1047 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 ZNF410Q86VK4 478 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 RDM1Q8NG50 284 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 URGCPQ8TCY9 931 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 PGBD4Q96DM1 585 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 ZNF668Q96K58 619 aaPredicted RBP14.19□□□□□ -0.14
SKA3-206ENST00000475251 TBC1D13Q9NVG8 400 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 IGSF9Q9P2J2 1179 aa14.19□□□□□ -0.14
SKA3-206ENST00000475251 ZNF862O60290 1169 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 GAS7O60861 476 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 GALTP07902 379 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 FGFR4P22455 802 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 KLRC2P26717 231 aa14.18□□□□□ -0.14
SKA3-206ENST00000475251 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms