RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 SLC28A3Q9HAS3 691 aa18.03■□□□□ 0.48
SRM-204ENST00000475189 GPRC5CQ9NQ84 441 aa18.03■□□□□ 0.48
SRM-204ENST00000475189 RGS18Q9NS28 235 aa18.03■□□□□ 0.48
SRM-204ENST00000475189 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
SRM-204ENST00000475189 FBXO2Q9UK22 296 aaPredicted RBP18.03■□□□□ 0.48
SRM-204ENST00000475189 SRPRBQ9Y5M8 271 aaKnown RBP18.03■□□□□ 0.48
SRM-204ENST00000475189 CHD9Q3L8U1 2897 aa18.03■□□□□ 0.48
SRM-204ENST00000475189 DENND3A2RUS2 1198 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 LCHNA4D1U4 455 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 SLC26A4O43511 780 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 ARHGEF15O94989 841 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 GLRA2P23416 452 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 UBA7P41226 1012 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 TMEM119Q4V9L6 283 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 CRIPAKQ8N1N5 446 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 RNF149Q8NC42 400 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.48
SRM-204ENST00000475189 PLIN2Q99541 437 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 NT5C3AQ9H0P0 336 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 CSRNP2Q9H175 543 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 MINDY3Q9H8M7 445 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
SRM-204ENST00000475189 MYH11P35749 1972 aa18.02■□□□□ 0.47
SRM-204ENST00000475189 C9IYK1 514 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 SFPQP23246 707 aaKnown RBP eCLIP18.01■□□□□ 0.47
SRM-204ENST00000475189 SARSP49591 514 aaKnown RBP18.01■□□□□ 0.47
SRM-204ENST00000475189 POU5F1BQ06416 359 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 CAPSQ13938 189 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 PPP2R2DQ66LE6 453 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 CDK5RAP3Q96JB5 506 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 CLIC6Q96NY7 704 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 C1orf112Q9NSG2 853 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
SRM-204ENST00000475189 TCHHQ07283 1943 aa18■□□□□ 0.47
SRM-204ENST00000475189 COL4A6Q14031 1691 aa18■□□□□ 0.47
SRM-204ENST00000475189 BRD1O95696 1058 aa18■□□□□ 0.47
SRM-204ENST00000475189 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 PHKA2P46019 1235 aa18■□□□□ 0.47
SRM-204ENST00000475189 PTENP60484 403 aa18■□□□□ 0.47
SRM-204ENST00000475189 FAM189BP81408 668 aa18■□□□□ 0.47
SRM-204ENST00000475189 TAP1Q03518 808 aa18■□□□□ 0.47
SRM-204ENST00000475189 TFDP1Q14186 410 aa18■□□□□ 0.47
SRM-204ENST00000475189 GRIN2CQ14957 1233 aa18■□□□□ 0.47
SRM-204ENST00000475189 STK38Q15208 465 aa18■□□□□ 0.47
SRM-204ENST00000475189 FOXD4L6Q3SYB3 417 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 SPECC1Q5M775 1068 aa18■□□□□ 0.47
SRM-204ENST00000475189 FOXD4L3Q6VB84 417 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 USP49Q70CQ1 688 aa18■□□□□ 0.47
SRM-204ENST00000475189 SLC24A5Q71RS6 500 aa18■□□□□ 0.47
SRM-204ENST00000475189 CATSPER4Q7RTX7 472 aa18■□□□□ 0.47
SRM-204ENST00000475189 IFNLR1Q8IU57 520 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 NPAS4Q8IUM7 802 aa18■□□□□ 0.47
SRM-204ENST00000475189 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 CALML4Q96GE6 196 aa18■□□□□ 0.47
SRM-204ENST00000475189 EPSTI1Q96J88 318 aa18■□□□□ 0.47
SRM-204ENST00000475189 GUCD1Q96NT3 240 aa18■□□□□ 0.47
SRM-204ENST00000475189 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
SRM-204ENST00000475189 POLD4Q9HCU8 107 aa18■□□□□ 0.47
SRM-204ENST00000475189 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
SRM-204ENST00000475189 NLRC5Q86WI3 1866 aa18■□□□□ 0.47
SRM-204ENST00000475189 STAG3L1P0CL83 205 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 KARSQ15046 597 aaKnown RBP17.99■□□□□ 0.47
SRM-204ENST00000475189 RINT1Q6NUQ1 792 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 C1orf186Q6ZWK4 172 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 SPRED2Q7Z698 418 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 KRI1Q8N9T8 703 aaKnown RBP17.99■□□□□ 0.47
SRM-204ENST00000475189 LRRC15Q8TF66 581 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 BSNDQ8WZ55 320 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 ZNF689Q96CS4 500 aaPredicted RBP17.99■□□□□ 0.47
SRM-204ENST00000475189 YME1L1Q96TA2 773 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
SRM-204ENST00000475189 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
SRM-204ENST00000475189 DAXXQ9UER7 740 aaPredicted RBP17.99■□□□□ 0.47
SRM-204ENST00000475189 LINC01553A4QN01 128 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 SPTLC2O15270 562 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 DGKIO75912 1065 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 YEATS4O95619 227 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 PLA2G4BP0C869 781 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 SYT2Q8N9I0 419 aaPredicted RBP17.98■□□□□ 0.47
SRM-204ENST00000475189 CDX2Q99626 313 aaPredicted RBP17.98■□□□□ 0.47
SRM-204ENST00000475189 RUSC1Q9BVN2 902 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 NFKBIZQ9BYH8 718 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 BLOC1S4Q9NUP1 217 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
SRM-204ENST00000475189 PPP6R2O75170 966 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
SRM-204ENST00000475189 PLCG1P19174 1290 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 IBSPP21815 317 aaPredicted RBP17.97■□□□□ 0.47
SRM-204ENST00000475189 SLC12A3P55017 1021 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 MBTD1Q05BQ5 628 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 ATL3Q6DD88 541 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 DAW1Q8N136 415 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 SYMPKQ92797 1274 aaKnown RBP17.97■□□□□ 0.47
SRM-204ENST00000475189 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
SRM-204ENST00000475189 ELAC1Q9H777 363 aaKnown RBP17.97■□□□□ 0.47
SRM-204ENST00000475189 CERS4Q9HA82 394 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms