RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.78■□□□□ 0.12
CCDC78-209ENST00000474647 MSH4O15457 936 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
CCDC78-209ENST00000474647 DARSP14868 501 aaKnown RBP15.78■□□□□ 0.12
CCDC78-209ENST00000474647 BCAR1P56945 870 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 ITIH3Q06033 890 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
CCDC78-209ENST00000474647 LONRF3Q496Y0 759 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 MTERF2Q49AM1 385 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 LRCH2Q5VUJ6 765 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 MRPL43Q8N983 215 aaKnown RBP15.78■□□□□ 0.12
CCDC78-209ENST00000474647 CCDC148Q8NFR7 591 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 BICD2Q8TD16 824 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 AUTS2Q8WXX7 1259 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 GJA10Q969M2 543 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 LENG9Q96B70 501 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 NECTIN4Q96NY8 510 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 TEKT3Q9BXF9 490 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 SORCS3Q9UPU3 1222 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 SPTBN4Q9H254 2564 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
CCDC78-209ENST00000474647 BRD1O95696 1058 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 CXCL14O95715 111 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 EOMESO95936 686 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 CIITAP33076 1130 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 MTHFRP42898 656 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 TWF2Q6IBS0 349 aaKnown RBP15.77■□□□□ 0.12
CCDC78-209ENST00000474647 ZNF598Q86UK7 904 aaKnown RBP15.77■□□□□ 0.12
CCDC78-209ENST00000474647 UBALD2Q8IYN6 164 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 C12orf76Q8N812 135 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-209ENST00000474647 LPPQ93052 612 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 JAKMIP1Q96N16 626 aaKnown RBP15.77■□□□□ 0.12
CCDC78-209ENST00000474647 SLC26A6Q9BXS9 759 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 IRF2BPLQ9H1B7 796 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 ADAM7Q9H2U9 754 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 UNC45AQ9H3U1 944 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 VPS54Q9P1Q0 977 aa15.77■□□□□ 0.12
CCDC78-209ENST00000474647 WDR87Q6ZQQ6 2873 aa15.77■□□□□ 0.11
CCDC78-209ENST00000474647 NID2Q14112 1375 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 TMEM150BA6NC51 233 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 CDC45O75419 566 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 ASGR2P07307 311 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 SFNP31947 248 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 JAK3P52333 1124 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 DRP2Q13474 957 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 KANK3Q6NY19 840 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 MIER3Q7Z3K6 550 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 TMEM173Q86WV6 379 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-209ENST00000474647 TDRD5Q8NAT2 981 aaKnown RBP15.76■□□□□ 0.11
CCDC78-209ENST00000474647 SH2D3AQ9BRG2 576 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 GCOM2Q9BZD3 368 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-209ENST00000474647 GBP3Q9H0R5 595 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 DBR1Q9UK59 544 aaKnown RBP15.76■□□□□ 0.11
CCDC78-209ENST00000474647 PIN4Q9Y237 131 aaKnown RBP15.76■□□□□ 0.11
CCDC78-209ENST00000474647 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
CCDC78-209ENST00000474647 A0A087WZ62 844 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 EPCAMP16422 314 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 SFPQP23246 707 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC78-209ENST00000474647 PHKA2P46019 1235 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 RNASELQ05823 741 aaKnown RBP15.75■□□□□ 0.11
CCDC78-209ENST00000474647 SLC5A5Q92911 643 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 SNX27Q96L92 541 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 RIT2Q99578 217 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-209ENST00000474647 MFSD1Q9H3U5 465 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 DZANK1Q9NVP4 752 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 DOCK8Q8NF50 2099 aa15.75■□□□□ 0.11
CCDC78-209ENST00000474647 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-209ENST00000474647 DNM2P50570 870 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 KIAA1841Q6NSI8 718 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 RHPN2Q8IUC4 686 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 TMEM105Q8N8V8 129 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-209ENST00000474647 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 LIMD1Q9UGP4 676 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
CCDC78-209ENST00000474647 MYH15Q9Y2K3 1946 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 MEIS3P2A8K0S8 358 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 CTSAP10619 480 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 USP11P51784 963 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 NLRP5P59047 1200 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 CCT2P78371 535 aaKnown RBP15.73■□□□□ 0.11
CCDC78-209ENST00000474647 TARBP2Q15633 366 aaKnown RBP15.73■□□□□ 0.11
CCDC78-209ENST00000474647 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 GLB1LQ6UWU2 654 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 TMC5Q6UXY8 1006 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 CATSPER4Q7RTX7 472 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 CABP7Q86V35 215 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 TBCKQ8TEA7 893 aa15.73■□□□□ 0.11
CCDC78-209ENST00000474647 BCL7CQ8WUZ0 217 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-209ENST00000474647 IGSF21Q96ID5 467 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms