RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 NLRC3Q7RTR2 1065 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 TMPRSS7Q7RTY8 843 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 ACER1Q8TDN7 264 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
VPS50-211ENST00000474412 SHISA4Q96DD7 197 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 FERD3LQ96RJ6 166 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 PUS7LQ9H0K6 701 aaKnown RBP8.35□□□□□ -1.07
VPS50-211ENST00000474412 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
VPS50-211ENST00000474412 DUSP15Q9H1R2 295 aaPredicted RBP8.35□□□□□ -1.07
VPS50-211ENST00000474412 KIAA1522Q9P206 1035 aaPredicted RBP8.35□□□□□ -1.07
VPS50-211ENST00000474412 SRRDQ9UH36 339 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 RNF114Q9Y508 228 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 LTBP2Q14767 1821 aa8.35□□□□□ -1.07
VPS50-211ENST00000474412 M0R2C6 588 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 UBOX5O94941 541 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 ASNSP08243 561 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 EN2P19622 333 aaPredicted RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 BACE1P56817 501 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 FASTKD5Q7L8L6 764 aaKnown RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 NT5DC4Q86YG4 428 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 CRNKL1Q9BZJ0 848 aaKnown RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS50-211ENST00000474412 CNNM2Q9H8M5 875 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 EPB41L4AQ9HCS5 686 aaPredicted RBP8.34□□□□□ -1.07
VPS50-211ENST00000474412 TXNRD2Q9NNW7 524 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 DUSP13Q9UII6 198 aa8.34□□□□□ -1.07
VPS50-211ENST00000474412 WASH4PA8MWX3 477 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 PAPLNO95428 1278 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 KIF22Q14807 665 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 SEPT2Q15019 361 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 FAM110CQ1W6H9 321 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 CLEC16AQ2KHT3 1053 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 KIAA1755Q5JYT7 1200 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
VPS50-211ENST00000474412 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 SEC62Q99442 399 aaKnown RBP8.33□□□□□ -1.08
VPS50-211ENST00000474412 FEZ1Q99689 392 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 GPR62Q9BZJ7 368 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 CHMP4BQ9H444 224 aaKnown RBP8.33□□□□□ -1.08
VPS50-211ENST00000474412 AS3MTQ9HBK9 375 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 ROBO3Q96MS0 1386 aa8.33□□□□□ -1.08
VPS50-211ENST00000474412 A0A1W2PRG0 241 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 MEIS3P2A8K0S8 358 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 TNPO2O14787 897 aaKnown RBP8.32□□□□□ -1.08
VPS50-211ENST00000474412 IGSF3O75054 1194 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 CNMDO75829 334 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 IMPDH2P12268 514 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 AKR1B1P15121 316 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 VCAM1P19320 739 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 FLT3LGP49771 235 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 PAK2Q13177 524 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 ABCB5Q2M3G0 1257 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 CERKLQ49MI3 558 aaPredicted RBP8.32□□□□□ -1.08
VPS50-211ENST00000474412 KBTBD3Q8NAB2 608 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 PAGR1Q9BTK6 254 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 PORCNQ9H237 461 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 SLC4A4Q9Y6R1 1079 aa8.32□□□□□ -1.08
VPS50-211ENST00000474412 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 FOXP2O15409 715 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 CLEC3AO75596 197 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 SRFP11831 508 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 NME1P15531 152 aaKnown RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 HERVK_113P62684 666 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 IRX3P78415 501 aaPredicted RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 RAD51AP2Q09MP3 1159 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 CCDC129Q6ZRS4 1044 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 TSPYL5Q86VY4 417 aaPredicted RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 RAET1EQ8TD07 263 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 CCDC120Q96HB5 630 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 C12orf42Q96LP6 360 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 ALPK1Q96QP1 1244 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 P2RX7Q99572 595 aaKnown RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS50-211ENST00000474412 TMOD4Q9NZQ9 345 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 CTNND2Q9UQB3 1225 aa8.31□□□□□ -1.08
VPS50-211ENST00000474412 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.31□□□□□ -1.08
VPS50-211ENST00000474412 GSG1L2A8MUP6 293 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 GPAA1O43292 621 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 ADCY3O60266 1144 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 ESR1P03372 595 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 CCL5P13501 91 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 MX1P20591 662 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 CCNFP41002 786 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 IRX6P78412 446 aaPredicted RBP8.3□□□□□ -1.08
VPS50-211ENST00000474412 GAB4Q2WGN9 574 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms