RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PLVAPQ9BX97 442 aa20.02■□□□□ 0.8
UPF3A-203ENST00000474056 RNF19AQ9NV58 838 aa20.02■□□□□ 0.8
UPF3A-203ENST00000474056 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.8
UPF3A-203ENST00000474056 COG5Q9UP83 839 aa20.02■□□□□ 0.8
UPF3A-203ENST00000474056 NCOR1O75376 2440 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 A0A087WWV3 80 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
UPF3A-203ENST00000474056 CSPG5O95196 566 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 SPATA31C1P0DKV0 1188 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 SFPQP23246 707 aaKnown RBP eCLIP20.01■□□□□ 0.79
UPF3A-203ENST00000474056 GJB2P29033 226 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 TIGD5Q53EQ6 642 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 PIGOQ8TEQ8 1089 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 PRPF31Q8WWY3 499 aaKnown RBP20.01■□□□□ 0.79
UPF3A-203ENST00000474056 P2RX5Q93086 422 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 HLA-CQ95604 372 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 INO80BQ9C086 356 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-203ENST00000474056 ALG13Q9NP73 1137 aaKnown RBP20.01■□□□□ 0.79
UPF3A-203ENST00000474056 KIF3AQ9Y496 699 aa20.01■□□□□ 0.79
UPF3A-203ENST00000474056 MED24O75448 989 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 ITGB1P05556 798 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 ATF7P17544 494 aaPredicted RBP20■□□□□ 0.79
UPF3A-203ENST00000474056 MCM2P49736 904 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 RARRES1P49788 294 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 TOB1P50616 345 aaPredicted RBP20■□□□□ 0.79
UPF3A-203ENST00000474056 KCNQ1P51787 676 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 LAMTOR4Q0VGL1 99 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 TCEAL5Q5H9L2 206 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 CATSPER4Q7RTX7 472 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 FERMT3Q86UX7 667 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 C4orf32Q8N8J7 132 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 TCP11Q8WWU5 503 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 SYMPKQ92797 1274 aaKnown RBP20■□□□□ 0.79
UPF3A-203ENST00000474056 LMAN2LQ9H0V9 348 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 MINDY3Q9H8M7 445 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 ANKEF1Q9NU02 776 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 DACT1Q9NYF0 836 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 PCDHB6Q9Y5E3 794 aa20■□□□□ 0.79
UPF3A-203ENST00000474056 A0A0U1RQF3 1178 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 SRGAP2CP0DJJ0 459 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 SPOUT1Q5T280 376 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 ZNF598Q86UK7 904 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 CATSPER3Q86XQ3 398 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 KLHL23Q8NBE8 558 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 RNF169Q8NCN4 708 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 CCDC43Q96MW1 224 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 CASD1Q96PB1 797 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 TMEM117Q9H0C3 514 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 NSUN3Q9H649 340 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 CWH43Q9H720 699 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 TUFT1Q9NNX1 390 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 CHST12Q9NRB3 414 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 TYW1Q9NV66 732 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 PLAGL2Q9UPG8 496 aa19.99■□□□□ 0.79
UPF3A-203ENST00000474056 PIN4Q9Y237 131 aaKnown RBP19.99■□□□□ 0.79
UPF3A-203ENST00000474056 DGAT1O75907 488 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 DNAJB1P25685 340 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 CAMK1Q14012 370 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 AAK1Q2M2I8 961 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 NAALADL2Q58DX5 795 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 CLLU1OSQ5K130 101 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 MCTP1Q6DN14 999 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 TWF2Q6IBS0 349 aaKnown RBP19.98■□□□□ 0.79
UPF3A-203ENST00000474056 SRGAP1Q7Z6B7 1085 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 RNF149Q8NC42 400 aa19.98■□□□□ 0.79
UPF3A-203ENST00000474056 POLR3CQ9BUI4 534 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-203ENST00000474056 UBE2ZQ9H832 354 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-203ENST00000474056 ASAP2O43150 1006 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 HOXA2O43364 376 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 USO1O60763 962 aaKnown RBP19.97■□□□□ 0.79
UPF3A-203ENST00000474056 BMP1P13497 986 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 PHKA2P46019 1235 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 POTEGQ6S5H5 508 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 LRRC55Q6ZSA7 311 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 SPPL3Q8TCT6 385 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 ASAP3Q8TDY4 903 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 BACH2Q9BYV9 841 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 AGPAT5Q9NUQ2 364 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 SMC3Q9UQE7 1217 aa19.97■□□□□ 0.79
UPF3A-203ENST00000474056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.96■□□□□ 0.79
UPF3A-203ENST00000474056 EOMESO95936 686 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 XRCC6P12956 609 aaKnown RBP eCLIP19.96■□□□□ 0.79
UPF3A-203ENST00000474056 RPA1P27694 616 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 FXR2P51116 673 aaKnown RBP eCLIP19.96■□□□□ 0.79
UPF3A-203ENST00000474056 PTGDRQ13258 359 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 ABI1Q8IZP0 508 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 LRRC43Q8N309 656 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 COLGALT1Q8NBJ5 622 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 ERMNQ8TAM6 284 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 HELQQ8TDG4 1101 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 ADAMTS19Q8TE59 1207 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 POF1BQ8WVV4 589 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 TRAIPQ9BWF2 469 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.96■□□□□ 0.79
UPF3A-203ENST00000474056 FAM105AQ9NUU6 356 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 PCDHB12Q9Y5F1 795 aa19.96■□□□□ 0.79
UPF3A-203ENST00000474056 H3BQV1 296 aa19.95■□□□□ 0.78
UPF3A-203ENST00000474056 IRS1P35568 1242 aa19.95■□□□□ 0.78
UPF3A-203ENST00000474056 ARL2P36404 184 aa19.95■□□□□ 0.78
UPF3A-203ENST00000474056 CAPSQ13938 189 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms