RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 FBXO22Q8NEZ5 403 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
VAMP4-203ENST00000474047 CDK5RAP3Q96JB5 506 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 SAMD11Q96NU1 681 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 ARID2Q68CP9 1835 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 ADGRA3Q8IWK6 1321 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 C9IYK1 514 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 STX6O43752 255 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 CDC25AP30304 524 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 NCBP1Q09161 790 aaKnown RBP15.8■□□□□ 0.12
VAMP4-203ENST00000474047 DSC3Q14574 896 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 IL17AQ16552 155 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
VAMP4-203ENST00000474047 SPRED2Q7Z698 418 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
VAMP4-203ENST00000474047 XPNPEP1Q9NQW7 623 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
VAMP4-203ENST00000474047 PIN4Q9Y237 131 aaKnown RBP15.8■□□□□ 0.12
VAMP4-203ENST00000474047 DLL1O00548 723 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 ERLIN2O94905 339 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 ADGRE1Q14246 886 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 SF3A1Q15459 793 aaKnown RBP15.79■□□□□ 0.12
VAMP4-203ENST00000474047 CCDC85BQ15834 202 aaPredicted RBP15.79■□□□□ 0.12
VAMP4-203ENST00000474047 SPOUT1Q5T280 376 aaKnown RBP15.79■□□□□ 0.12
VAMP4-203ENST00000474047 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 CMTR2Q8IYT2 770 aaKnown RBP15.79■□□□□ 0.12
VAMP4-203ENST00000474047 ABI1Q8IZP0 508 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 BHMT2Q9H2M3 363 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 IFT122Q9HBG6 1241 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 TMEM161AQ9NX61 479 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 RWDD3Q9Y3V2 267 aa15.79■□□□□ 0.12
VAMP4-203ENST00000474047 EPOPA6NHQ4 379 aa15.78■□□□□ 0.12
VAMP4-203ENST00000474047 CTNNB1P35222 781 aa15.78■□□□□ 0.12
VAMP4-203ENST00000474047 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
VAMP4-203ENST00000474047 RASSF8Q8NHQ8 419 aa15.78■□□□□ 0.12
VAMP4-203ENST00000474047 GDPD5Q8WTR4 605 aa15.78■□□□□ 0.12
VAMP4-203ENST00000474047 ZNF689Q96CS4 500 aaPredicted RBP15.78■□□□□ 0.12
VAMP4-203ENST00000474047 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
VAMP4-203ENST00000474047 ELAC1Q9H777 363 aaKnown RBP15.78■□□□□ 0.12
VAMP4-203ENST00000474047 LRRIQ4A6NIV6 560 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 TBKBP1A7MCY6 615 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 INO80B-WBP1J3KQ70 363 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 HOXA2O43364 376 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 SKIP12755 728 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 CYP11B2P19099 503 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 ARL2P36404 184 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 FAM189BP81408 668 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 GRB10Q13322 594 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 ECM1Q16610 540 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 ECHDC2Q86YB7 292 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 NT5C3AQ9H0P0 336 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
VAMP4-203ENST00000474047 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.11
VAMP4-203ENST00000474047 PDIA4P13667 645 aaKnown RBP15.77■□□□□ 0.11
VAMP4-203ENST00000474047 UBA7P41226 1012 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 GATMP50440 423 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 PTENP60484 403 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 CEBPZQ03701 1054 aaKnown RBP15.77■□□□□ 0.11
VAMP4-203ENST00000474047 RESTQ13127 1097 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 ASAP3Q8TDY4 903 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 CALML4Q96GE6 196 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 AK8Q96MA6 479 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 PLIN2Q99541 437 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 GPRC5CQ9NQ84 441 aa15.77■□□□□ 0.11
VAMP4-203ENST00000474047 A0A0U1RQF3 1178 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 E9PMD0 336 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 EYA4O95677 639 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 EOMESO95936 686 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 FGFR1P11362 822 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 GLRA2P23416 452 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 POU5F1BQ06416 359 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 GPM6BQ13491 265 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 CAPSQ13938 189 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 CABP7Q86V35 215 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 CRIPAKQ8N1N5 446 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 IFT74Q96LB3 600 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 MINDY3Q9H8M7 445 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 CLIC4Q9Y696 253 aa15.76■□□□□ 0.11
VAMP4-203ENST00000474047 RB1P06400 928 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 LONP1P36776 959 aaKnown RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 BMPR1AP36894 532 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 RAB27AP51159 221 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 PPP2R5AQ15172 486 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 PCBP1Q15365 356 aaKnown RBP eCLIP15.75■□□□□ 0.116e-6■□□□□ 9.5
VAMP4-203ENST00000474047 SKIV2LQ15477 1246 aaKnown RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 PTPROQ16827 1216 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 TMEM132AQ24JP5 1023 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 FAM173BQ6P4H8 233 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 ZBTB8OSQ8IWT0 167 aa15.75■□□□□ 0.11
VAMP4-203ENST00000474047 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 RC3H2Q9HBD1 1191 aaKnown RBP15.75■□□□□ 0.11
VAMP4-203ENST00000474047 AAASQ9NRG9 546 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms