RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 ZMIZ1Q9ULJ6 1067 aa12.77□□□□□ -0.37
MACF1-215ENST00000473843 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
MACF1-215ENST00000473843 HELZ2Q9BYK8 2649 aaKnown RBP12.77□□□□□ -0.37
MACF1-215ENST00000473843 COL4A3Q01955 1670 aa12.77□□□□□ -0.37
MACF1-215ENST00000473843 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
MACF1-215ENST00000473843 CARNS1A5YM72 827 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 NT5C2P49902 561 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 CLCN4P51793 760 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 BCAR1P56945 870 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 CLLU1OSQ5K130 101 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
MACF1-215ENST00000473843 FAM228AQ86W67 206 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 PCYT2Q99447 389 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
MACF1-215ENST00000473843 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 NEDD4P46934 1319 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 SPEGQ15772 3267 aa12.76□□□□□ -0.37
MACF1-215ENST00000473843 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 ANHXE9PGG2 379 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 ATP9AO75110 1047 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 RETP07949 1114 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 HTR4Q13639 388 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 ECHDC2Q86YB7 292 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
MACF1-215ENST00000473843 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
MACF1-215ENST00000473843 ASH1LQ9NR48 2969 aaKnown RBP12.75□□□□□ -0.37
MACF1-215ENST00000473843 FOXD2O60548 495 aaPredicted RBP12.74□□□□□ -0.37
MACF1-215ENST00000473843 KLRC2P26717 231 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 CRYBB1P53674 252 aaPredicted RBP12.74□□□□□ -0.37
MACF1-215ENST00000473843 PRKCQQ04759 706 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 WTAPQ15007 396 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 CSRP2Q16527 193 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 IL31Q6EBC2 164 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 UNQ6494/PRO21346Q6UXR6 183 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 TMEM173Q86WV6 379 aaPredicted RBP12.74□□□□□ -0.37
MACF1-215ENST00000473843 HOMER1Q86YM7 354 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 ENAHQ8N8S7 591 aaPredicted RBP12.74□□□□□ -0.37
MACF1-215ENST00000473843 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 KLHL5Q96PQ7 755 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
MACF1-215ENST00000473843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.37
MACF1-215ENST00000473843 FAM170BA6NMN3 283 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 ZC3H11AO75152 810 aaKnown RBP eCLIP12.73□□□□□ -0.37
MACF1-215ENST00000473843 MS4A1P11836 297 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 LAMP2P13473 410 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 KLRC1P26715 233 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 MLF2Q15773 248 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 LPAL2Q16609 132 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 ELMSAN1Q6PJG2 1045 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 TSSK4Q6SA08 328 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 RSPO2Q6UXX9 243 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 PLPPR4Q7Z2D5 763 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 KDF1Q8NAX2 398 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 RNF169Q8NCN4 708 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 HELQQ8TDG4 1101 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 OSMRQ99650 979 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
MACF1-215ENST00000473843 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
MACF1-215ENST00000473843 CCDC195A0A1B0GUA6 201 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 INPPL1O15357 1258 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 GDF9O60383 454 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 GPC5P78333 572 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 KIZQ2M2Z5 673 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 ZBTB41Q5SVQ8 909 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 CELF5Q8N6W0 485 aaKnown RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 BCL7CQ8WUZ0 217 aaPredicted RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 RSPH1Q8WYR4 309 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 PIGSQ96S52 555 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 JPH1Q9HDC5 661 aaPredicted RBP12.72□□□□□ -0.37
MACF1-215ENST00000473843 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 DPP7Q9UHL4 492 aa12.72□□□□□ -0.37
MACF1-215ENST00000473843 COL1A2P08123 1366 aa12.71□□□□□ -0.37
MACF1-215ENST00000473843 ITGB5P18084 799 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms