RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 EFHBQ8N7U6 833 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 LPPQ93052 612 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 ZNF558Q96NG5 402 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 APOL5Q9BWW9 433 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 CLEC1BQ9P126 229 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 PRKAG3Q9UGI9 489 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 PIN4Q9Y237 131 aaKnown RBP13.4□□□□□ -0.26
SMPD4-217ENST00000473720 HCN4Q9Y3Q4 1203 aa13.4□□□□□ -0.26
SMPD4-217ENST00000473720 C2orf16Q68DN1 1984 aa13.4□□□□□ -0.27
SMPD4-217ENST00000473720 NT5C1B-RDH14C9J2C7 533 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 GPR37L1O60883 481 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 ALADP13716 330 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 KRT2P35908 639 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 QARSP47897 775 aaKnown RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 POLGP54098 1239 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 UBE3AQ05086 875 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 NR5A1Q13285 461 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 PPP2R5CQ13362 524 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 ANKRD1Q15327 319 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 TMC7Q7Z402 723 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 WASF1Q92558 559 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 FAM122AQ96E09 287 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 MSLNLQ96KJ4 702 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 TCF25Q9BQ70 676 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 CYP26B1Q9NR63 512 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
SMPD4-217ENST00000473720 VAV3Q9UKW4 847 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 MYH11P35749 1972 aa13.39□□□□□ -0.27
SMPD4-217ENST00000473720 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 IGKV6-21A0A0C4DH24 114 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 DCXO43602 365 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 MAFO75444 373 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 GCFC2P16383 781 aaKnown RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 KRT17Q04695 432 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 ME3Q16798 604 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 PPP4R3AQ6IN85 833 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 FAM43BQ6ZT52 329 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 HAS1Q92839 578 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 LXNQ9BS40 222 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-217ENST00000473720 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 KCNMB3Q9NPA1 279 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 MUTYHQ9UIF7 546 aa13.38□□□□□ -0.27
SMPD4-217ENST00000473720 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 ZBTB39O15060 712 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 DKC1O60832 514 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 EOMESO95936 686 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 SP100P23497 879 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 TECP42680 631 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 PHKA2P46019 1235 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 NEK4P51957 841 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 ANAPC15P60006 121 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 DUSP6Q16828 381 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 XKR9Q5GH70 373 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 ZNF410Q86VK4 478 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 SMRP1Q8NCR6 262 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 VN1R2Q8NFZ6 395 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 SLC7A3Q8WY07 619 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 NAP1L4Q99733 375 aaKnown RBP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 USP15Q9Y4E8 981 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-217ENST00000473720 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
SMPD4-217ENST00000473720 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 PRR33A8MZF0 331 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 FSCN2O14926 492 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 JAK2O60674 1132 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
SMPD4-217ENST00000473720 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
SMPD4-217ENST00000473720 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms