RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 MTRQ99707 1265 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 DACT1Q9NYF0 836 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 FGFR1P11362 822 aa25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 TFF2Q03403 129 aa25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 NAALADL2Q58DX5 795 aa25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 ECHDC2Q86YB7 292 aa25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 PRPF31Q8WWY3 499 aaKnown RBP25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 CCDC43Q96MW1 224 aaKnown RBP25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 CHST12Q9NRB3 414 aa25.15■■□□□ 1.62
PTP4A1-203ENST00000473334 GRM6O15303 877 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 HOXA2O43364 376 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 TECP42680 631 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 LAMTOR4Q0VGL1 99 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 IFT122Q9HBG6 1241 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 TUFT1Q9NNX1 390 aa25.14■■□□□ 1.62
PTP4A1-203ENST00000473334 CUL9Q8IWT3 2517 aa25.14■■□□□ 1.61
PTP4A1-203ENST00000473334 A0A0U1RQF3 1178 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 ASAP2O43150 1006 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 GJB2P29033 226 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 RARRES1P49788 294 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 NBR1Q14596 966 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 CATSPER4Q7RTX7 472 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 FERMT3Q86UX7 667 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 TMEM117Q9H0C3 514 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 NSUN3Q9H649 340 aaKnown RBP25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 XPNPEP1Q9NQW7 623 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 RNF19AQ9NV58 838 aa25.13■■□□□ 1.61
PTP4A1-203ENST00000473334 DGAT1O75907 488 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 SPATA31C1P0DKV0 1188 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 XRCC6P12956 609 aaKnown RBP eCLIP25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 SPOUT1Q5T280 376 aaKnown RBP25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 SRGAP1Q7Z6B7 1085 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 ERMNQ8TAM6 284 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 PIGOQ8TEQ8 1089 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 POLR3CQ9BUI4 534 aaPredicted RBP25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 PLAGL2Q9UPG8 496 aa25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 PIN4Q9Y237 131 aaKnown RBP25.12■■□□□ 1.61
PTP4A1-203ENST00000473334 MED24O75448 989 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 EOMESO95936 686 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 SRGAP2CP0DJJ0 459 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 TOB1P50616 345 aaPredicted RBP25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 TCEAL5Q5H9L2 206 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 CATSPER3Q86XQ3 398 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 ABI1Q8IZP0 508 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 C4orf32Q8N8J7 132 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 KLHL23Q8NBE8 558 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 RNF169Q8NCN4 708 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 CASD1Q96PB1 797 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 TRAIPQ9BWF2 469 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 ALG13Q9NP73 1137 aaKnown RBP25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 AAASQ9NRG9 546 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 PLXNA4Q9HCM2 1894 aa25.11■■□□□ 1.61
PTP4A1-203ENST00000473334 ITGB1P05556 798 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 FXR2P51116 673 aaKnown RBP eCLIP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 MXD4Q14582 209 aaPredicted RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 MCTP1Q6DN14 999 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 TWF2Q6IBS0 349 aaKnown RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 ZNF598Q86UK7 904 aaKnown RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 RNF149Q8NC42 400 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 UBE2ZQ9H832 354 aaPredicted RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 AGPAT5Q9NUQ2 364 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 TYW1Q9NV66 732 aaKnown RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 HCSTQ9UBK5 93 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 SMC3Q9UQE7 1217 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 PCDHB6Q9Y5E3 794 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 PCDHB12Q9Y5F1 795 aa25.1■■□□□ 1.61
PTP4A1-203ENST00000473334 H3BQV1 296 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 SKIP12755 728 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 ATF7P17544 494 aaPredicted RBP25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 RPA1P27694 616 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 PHKA2P46019 1235 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 KCNQ1P51787 676 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 HAUS3Q68CZ6 603 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 SPPL3Q8TCT6 385 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 NACC1Q96RE7 527 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 BACH2Q9BYV9 841 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 CWH43Q9H720 699 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 MINDY3Q9H8M7 445 aa25.09■■□□□ 1.61
PTP4A1-203ENST00000473334 A0A087WWV3 80 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 USO1O60763 962 aaKnown RBP25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 LAG3P18627 525 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 PTGDRQ13258 359 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 TFDP1Q14186 410 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 CSPP1Q1MSJ5 1256 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 CLLU1OSQ5K130 101 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 POTEGQ6S5H5 508 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 LRRC43Q8N309 656 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 COLGALT1Q8NBJ5 622 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 ADAMTS19Q8TE59 1207 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 DBR1Q9UK59 544 aaKnown RBP25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 BRWD1Q9NSI6 2320 aa25.08■■□□□ 1.61
PTP4A1-203ENST00000473334 LAD1O00515 517 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 BMP1P13497 986 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 MUTP22033 750 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 ARL2P36404 184 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 RAB27AP51159 221 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 POU5F1BQ06416 359 aa25.07■■□□□ 1.6
PTP4A1-203ENST00000473334 CAMK1Q14012 370 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms