RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ADCYAP1R1P41586 468 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 MCAMP43121 646 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CARSP49589 748 aaKnown RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 RCAN1P53805 252 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 PPP4CP60510 307 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CUL1Q13616 776 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 GRB14Q14449 540 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 SNX17Q15036 470 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 NFXL1Q6ZNB6 911 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CATSPERGQ6ZRH7 1159 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 ZFAND2BQ8WV99 257 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 RAPGEF5Q92565 580 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 PAIP2Q9BPZ3 127 aaKnown RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 EXOC1Q9NV70 894 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 PCDHA13Q9Y5I0 950 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 OPLAHO14841 1288 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM153BP0C7A2 387 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 ARID4AP29374 1257 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
APTX-216ENST00000472896 TNNC1P63316 161 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 GUCY2DQ02846 1103 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 PPARAQ07869 468 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 QPCTQ16769 361 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM153CQ494X1 144 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 SPDYCQ5MJ68 293 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 SLC30A9Q6PML9 568 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM43BQ6ZT52 329 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM114A1Q8IWE2 563 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 DRAXINQ8NBI3 349 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 ACER1Q8TDN7 264 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 IGDCC4Q8TDY8 1250 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
APTX-216ENST00000472896 GINM1Q9NU53 330 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.98□□□□□ -0.65
APTX-216ENST00000472896 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 FAM153AQ9UHL3 310 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
APTX-216ENST00000472896 FLT1P17948 1338 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 A0A087X0B3 334 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CES2O00748 559 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 COBLO75128 1261 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 SKAP2O75563 359 aaPredicted RBP10.97□□□□□ -0.65
APTX-216ENST00000472896 GLI1P08151 1106 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 MYBP10242 640 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 XBP1P17861 261 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CCNA1P78396 465 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 TLE2Q04725 743 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 SPRED3Q2MJR0 410 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CYB5R4Q7L1T6 521 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 SMYD4Q8IYR2 804 aaPredicted RBP10.97□□□□□ -0.65
APTX-216ENST00000472896 PARD3BQ8TEW8 1205 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CASKIN2Q8WXE0 1202 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 TBC1D31Q96DN5 1066 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CHMP6Q96FZ7 201 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 IFIH1Q9BYX4 1025 aaKnown RBP10.97□□□□□ -0.65
APTX-216ENST00000472896 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 LY9Q9HBG7 655 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 SLC5A4Q9NY91 659 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 CAPN6Q9Y6Q1 641 aa10.97□□□□□ -0.65
APTX-216ENST00000472896 STXBP3O00186 592 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 RTN3O95197 1032 aaPredicted RBP10.96□□□□□ -0.65
APTX-216ENST00000472896 TRIM21P19474 475 aaKnown RBP10.96□□□□□ -0.65
APTX-216ENST00000472896 HPDP32754 393 aaPredicted RBP10.96□□□□□ -0.65
APTX-216ENST00000472896 PEX19P40855 299 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 PPP1R2P41236 205 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 DYNLL1P63167 89 aaKnown RBP10.96□□□□□ -0.65
APTX-216ENST00000472896 ROR2Q01974 943 aaKnown RBP10.96□□□□□ -0.65
APTX-216ENST00000472896 CTDSPL2Q05D32 466 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 LRRC41Q15345 812 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 CMPK2Q5EBM0 449 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 IRF2BP1Q8IU81 584 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 KIRREL3Q8IZU9 778 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 ADSSL1Q8N142 457 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 IFT81Q8WYA0 676 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 NOX5Q96PH1 765 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 TFR2Q9UP52 801 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 NFS1Q9Y697 457 aa10.96□□□□□ -0.65
APTX-216ENST00000472896 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
APTX-216ENST00000472896 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
APTX-216ENST00000472896 AP1G2O75843 785 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms