RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 QRSL1Q9H0R6 528 aaKnown RBP7.72□□□□□ -1.17
CLK1-209ENST00000472679 CCM2LQ9NUG4 571 aaPredicted RBP7.72□□□□□ -1.17
CLK1-209ENST00000472679 POLR3BQ9NW08 1133 aaPredicted RBP7.72□□□□□ -1.17
CLK1-209ENST00000472679 INVSQ9Y283 1065 aa7.72□□□□□ -1.17
CLK1-209ENST00000472679 MT-CO1P00395 513 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 MEOX1P50221 254 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 SRSF2Q01130 221 aaKnown RBP7.71□□□□□ -1.18
CLK1-209ENST00000472679 ADAM15Q13444 863 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 TOR2AQ5JU69 321 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 AGBL4Q5VU57 503 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 HIST1H2AHQ96KK5 128 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 WDR92Q96MX6 357 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 SMAD5Q99717 465 aaKnown RBP7.71□□□□□ -1.18
CLK1-209ENST00000472679 HIST1H2AJQ99878 128 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 ADAM7Q9H2U9 754 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 EVLQ9UI08 416 aaPredicted RBP7.71□□□□□ -1.18
CLK1-209ENST00000472679 WASHC2AQ641Q2 1341 aa7.71□□□□□ -1.18
CLK1-209ENST00000472679 MAFGO15525 162 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 BORAQ6PGQ7 559 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 KCNK18Q7Z418 384 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 DPP7Q9UHL4 492 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 FAM184BQ9ULE4 1060 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 TNKSO95271 1327 aa7.7□□□□□ -1.18
CLK1-209ENST00000472679 C2orf78A6NCI8 922 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 FZD9O00144 591 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 INHBBP09529 407 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 MYBL2P10244 700 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 CNR2P34972 360 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 ACAP1Q15027 740 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 PGM2L1Q6PCE3 622 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 KLHDC10Q6PID8 442 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 LGI4Q8N135 537 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
CLK1-209ENST00000472679 OR14C36Q8NHC7 312 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 PPP1R14CQ8TAE6 165 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 TSPEARQ8WU66 669 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 OR10A2Q9H208 303 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 DNAJC28Q9NX36 388 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 VWA7Q9Y334 891 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 CTDP1Q9Y5B0 961 aaPredicted RBP7.69□□□□□ -1.18
CLK1-209ENST00000472679 CDY2AQ9Y6F7 541 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 SLC4A7Q9Y6M7 1214 aa7.69□□□□□ -1.18
CLK1-209ENST00000472679 PRICKLE3O43900 615 aaPredicted RBP7.68□□□□□ -1.18
CLK1-209ENST00000472679 SEC24DO94855 1032 aaPredicted RBP7.68□□□□□ -1.18
CLK1-209ENST00000472679 CNOT4O95628 575 aaKnown RBP7.68□□□□□ -1.18
CLK1-209ENST00000472679 PDGFRBP09619 1106 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 CDK17Q00537 523 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 EXOSC10Q01780 885 aaKnown RBP7.68□□□□□ -1.18
CLK1-209ENST00000472679 CD69Q07108 199 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 FZD5Q13467 585 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 FRMD5Q7Z6J6 570 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 ANKRD13AQ8IZ07 590 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 RSAD2Q8WXG1 361 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 PTPN18Q99952 460 aa7.68□□□□□ -1.18
CLK1-209ENST00000472679 TYW1Q9NV66 732 aaKnown RBP7.68□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA12O60330 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 OSMP13725 252 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 GPR15P49685 360 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 CCT2P78371 535 aaKnown RBP7.67□□□□□ -1.18
CLK1-209ENST00000472679 MRPS9P82933 396 aaKnown RBP7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCBP2Q15366 365 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLK1-209ENST00000472679 ZMAT1Q5H9K5 638 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 USP30Q70CQ3 517 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 CLEC14AQ86T13 490 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 GFM2Q969S9 779 aaKnown RBP7.67□□□□□ -1.18
CLK1-209ENST00000472679 FUBP3Q96I24 572 aaKnown RBP eCLIP7.67□□□□□ -1.186e-7■■□□□ 13.5
CLK1-209ENST00000472679 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 FAXDC2Q96IV6 333 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 OSBPL6Q9BZF3 934 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA9Q9Y5G4 932 aaKnown RBP7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA8Q9Y5G5 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA7Q9Y5G6 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA6Q9Y5G7 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA3Q9Y5H0 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 PCDHGA2Q9Y5H1 932 aa7.67□□□□□ -1.18
CLK1-209ENST00000472679 RBM8AQ9Y5S9 174 aaKnown RBP7.67□□□□□ -1.18
CLK1-209ENST00000472679 TRIM75PA6NK02 468 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 MATN2O00339 956 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 LY86O95711 162 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 GAAP10253 952 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 HOXA5P20719 270 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 MTNR1BP49286 362 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 PPP2CBP62714 309 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 PPP2CAP67775 309 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 ATP2C1P98194 919 aaPredicted RBP7.66□□□□□ -1.18
CLK1-209ENST00000472679 HGFACQ04756 655 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 MGAT5Q09328 741 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 MUM1Q2TAK8 710 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 AUTS2Q8WXX7 1259 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 CFHR4Q92496 578 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 SLC2A13Q96QE2 648 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 MKS1Q9NXB0 559 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
CLK1-209ENST00000472679 A0A0G2JLL6 359 aaPredicted RBP7.65□□□□□ -1.18
CLK1-209ENST00000472679 RBP3P10745 1247 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms