RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF484Q5JVG2 852 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 ATAT1Q5SQI0 421 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 ODR4Q5SWX8 454 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 RARS2Q5T160 578 aaKnown RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 PDXDC2PQ6P474 469 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 ZC3H14Q6PJT7 736 aaKnown RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 FAM43BQ6ZT52 329 aaPredicted RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 SGMS1Q86VZ5 419 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 TMEM173Q86WV6 379 aaPredicted RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 MICU3Q86XE3 530 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 MRPL43Q8N983 215 aaKnown RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 ACSF2Q96CM8 615 aaPredicted RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 TCEANC2Q96MN5 208 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 HCFC2Q9Y5Z7 792 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 SLC12A7Q9Y666 1083 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 DNAH14Q0VDD8 3507 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 EVPLQ92817 2033 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 BACH1O14867 736 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CSDE1O75534 798 aaKnown RBP10.59□□□□□ -0.71
VCL-204ENST00000472585 CALM1P0DP23 149 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CALM2P0DP24 149 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CALM3P0DP25 149 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 FGFR4P22455 802 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CDC27P30260 824 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 PPM1AP35813 382 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CLCN3P51790 818 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 NAPAP54920 295 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 EXOSC10Q01780 885 aaKnown RBP10.59□□□□□ -0.71
VCL-204ENST00000472585 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
VCL-204ENST00000472585 JAKMIP3Q5VZ66 844 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
VCL-204ENST00000472585 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 SIX5Q8N196 739 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 SLC39A11Q8N1S5 342 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 AUTS2Q8WXX7 1259 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
VCL-204ENST00000472585 RUBCNQ92622 972 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 CYP26B1Q9NR63 512 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 R4GN57 208 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
VCL-204ENST00000472585 COL1A2P08123 1366 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 IPO5O00410 1097 aaKnown RBP10.58□□□□□ -0.72
VCL-204ENST00000472585 ZNF862O60290 1169 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 B4GALT3O60512 393 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
VCL-204ENST00000472585 CYP3A4P08684 503 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 NPR3P17342 541 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 NLRP11P59045 1033 aaKnown RBP10.58□□□□□ -0.72
VCL-204ENST00000472585 DRP2Q13474 957 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 TDGQ13569 410 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 ABI1Q8IZP0 508 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 LRRC71Q8N4P6 559 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 METTL13Q8N6R0 699 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 BCL7CQ8WUZ0 217 aaPredicted RBP10.58□□□□□ -0.72
VCL-204ENST00000472585 LENG9Q96B70 501 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 DLL3Q9NYJ7 618 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 SPG21Q9NZD8 308 aa10.58□□□□□ -0.72
VCL-204ENST00000472585 MAP1BP46821 2468 aaKnown RBP10.58□□□□□ -0.72
VCL-204ENST00000472585 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 HOXA2O43364 376 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 CXCL14O95715 111 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 EOMESO95936 686 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 EPCAMP16422 314 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 SDHBP21912 280 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
VCL-204ENST00000472585 ADCY7P51828 1080 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 RSPO4Q2I0M5 234 aaPredicted RBP10.57□□□□□ -0.72
VCL-204ENST00000472585 ADCK5Q3MIX3 580 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 FAM160B1Q5W0V3 765 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 EFCAB12Q6NXP0 572 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 OTOP3Q7RTS5 596 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 HELQQ8TDG4 1101 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 RIN2Q8WYP3 895 aaPredicted RBP10.57□□□□□ -0.72
VCL-204ENST00000472585 GJA10Q969M2 543 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 GABBR1Q9UBS5 961 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 CHD8Q9HCK8 2581 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 FANCMQ8IYD8 2048 aa10.57□□□□□ -0.72
VCL-204ENST00000472585 A0A0U1RQF3 1178 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 PPP1R37O75864 691 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 STBD1O95210 358 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
VCL-204ENST00000472585 ZNF76P36508 570 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms