RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PCBP1Q15365 356 aaKnown RBP eCLIP16.96■□□□□ 0.31
SDC3-203ENST00000471567 FAM102BQ5T8I3 360 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 SYT2Q8N9I0 419 aaPredicted RBP16.96■□□□□ 0.31
SDC3-203ENST00000471567 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 CLIC6Q96NY7 704 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 ADAM2Q99965 735 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 TIPINQ9BVW5 301 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 NFKBIZQ9BYH8 718 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 CHST12Q9NRB3 414 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
SDC3-203ENST00000471567 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.3
SDC3-203ENST00000471567 DENND3A2RUS2 1198 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 ZSCAN20P17040 1043 aaPredicted RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 TXLNAP40222 546 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 HTRA4P83105 476 aaPredicted RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 DNM1Q05193 864 aaKnown RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 CAPSQ13938 189 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 FOXD4L6Q3SYB3 417 aaPredicted RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 ZNF697Q5TEC3 545 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 FOXD4L3Q6VB84 417 aaPredicted RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 C1orf186Q6ZWK4 172 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 SLC24A5Q71RS6 500 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 MAEAQ7L5Y9 396 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 RASSF8Q8NHQ8 419 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 SYMPKQ92797 1274 aaKnown RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 KIFAP3Q92845 792 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 PLIN2Q99541 437 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 GPRC5CQ9NQ84 441 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 KCND2Q9NZV8 630 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
SDC3-203ENST00000471567 INSL6Q9Y581 213 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 LAMA3Q16787 3333 aa16.95■□□□□ 0.3
SDC3-203ENST00000471567 C9IYK1 514 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 MGEA5O60502 916 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 CSDE1O75534 798 aaKnown RBP16.94■□□□□ 0.3
SDC3-203ENST00000471567 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
SDC3-203ENST00000471567 SLC12A3P55017 1021 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 NUCB2P80303 420 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 FAM189BP81408 668 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
SDC3-203ENST00000471567 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 CATSPER4Q7RTX7 472 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 TMCO2Q7Z6W1 182 aaPredicted RBP16.94■□□□□ 0.3
SDC3-203ENST00000471567 NPAS4Q8IUM7 802 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 CRIPAKQ8N1N5 446 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 NKX2-4Q9H2Z4 354 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 SLC28A3Q9HAS3 691 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 DACT1Q9NYF0 836 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 TTC3P53804 2025 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 PTPRSQ13332 1948 aa16.94■□□□□ 0.3
SDC3-203ENST00000471567 CUTAO60888 179 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 UPP2O95045 317 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 MYOGP15173 224 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 PLCG1P19174 1290 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 FGFR4P22455 802 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 GUCY2CP25092 1073 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 DDIT3P35638 169 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 NAMPTP43490 491 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 IFT74Q96LB3 600 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 RUSC1Q9BVN2 902 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 ZNF576Q9H609 170 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
SDC3-203ENST00000471567 MINDY3Q9H8M7 445 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 BLOC1S4Q9NUP1 217 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 STK17AQ9UEE5 414 aa16.93■□□□□ 0.3
SDC3-203ENST00000471567 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
SDC3-203ENST00000471567 CA3P07451 260 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 KRT85P78386 507 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 RRAGBQ5VZM2 374 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 CDCA2Q69YH5 1023 aaPredicted RBP16.92■□□□□ 0.3
SDC3-203ENST00000471567 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
SDC3-203ENST00000471567 RAD54LQ92698 747 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 YME1L1Q96TA2 773 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 C2orf40Q9H1Z8 148 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 TTYH1Q9H313 450 aaPredicted RBP16.92■□□□□ 0.3
SDC3-203ENST00000471567 C17orf75Q9HAS0 396 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 AGPAT5Q9NUQ2 364 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 KCNG1Q9UIX4 513 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 PCDHB7Q9Y5E2 793 aa16.92■□□□□ 0.3
SDC3-203ENST00000471567 A0A0U1RQF3 1178 aa16.91■□□□□ 0.3
SDC3-203ENST00000471567 INO80B-WBP1J3KQ70 363 aa16.91■□□□□ 0.3
SDC3-203ENST00000471567 HIP1RO75146 1068 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms