RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TUFT1Q9NNX1 390 aa8.56□□□□□ -1.04
TRIM59-204ENST00000471396 PADI3Q9ULW8 664 aa8.56□□□□□ -1.04
TRIM59-204ENST00000471396 NOC2LQ9Y3T9 749 aaKnown RBP8.56□□□□□ -1.04
TRIM59-204ENST00000471396 NCOR1O75376 2440 aa8.56□□□□□ -1.04
TRIM59-204ENST00000471396 COL4A6Q14031 1691 aa8.56□□□□□ -1.04
TRIM59-204ENST00000471396 MYO7AQ13402 2215 aa8.56□□□□□ -1.04
TRIM59-204ENST00000471396 GPR182O15218 404 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 GAS2O43903 313 aaKnown RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 MED24O75448 989 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 SPATA31C1P0DKV0 1188 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 COL9A1P20849 921 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 PRPHP41219 470 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 RARRES1P49788 294 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 NLRP11P59045 1033 aaKnown RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 HTRA4P83105 476 aaPredicted RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 ATP2C1P98194 919 aaPredicted RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 ZNF410Q86VK4 478 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 FAM228AQ86W67 206 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 CATSPER3Q86XQ3 398 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 NLRP7Q8WX94 980 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 PSPC1Q8WXF1 523 aaKnown RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 TOP1MTQ969P6 601 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 CDX2Q99626 313 aaPredicted RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 RAD9AQ99638 391 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 TMX1Q9H3N1 280 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 ANKEF1Q9NU02 776 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 SUCLA2Q9P2R7 463 aaPredicted RBP8.55□□□□□ -1.04
TRIM59-204ENST00000471396 ST3GAL5Q9UNP4 418 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 CHD9Q3L8U1 2897 aa8.55□□□□□ -1.04
TRIM59-204ENST00000471396 LCHNA4D1U4 455 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 ENPP3O14638 875 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 ZBTB39O15060 712 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 BMP15O95972 392 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 XRCC6P12956 609 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 DARSP14868 501 aaKnown RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 SYT1P21579 422 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 MUTP22033 750 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 EIF4BP23588 611 aaKnown RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 RPA1P27694 616 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 TAP1Q03518 808 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 RESTQ13127 1097 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 PDIA5Q14554 519 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 DTHD1Q6ZMT9 781 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 FERMT3Q86UX7 667 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 RHPN2Q8IUC4 686 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 IGSF22Q8N9C0 903 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 SNX29Q8TEQ0 813 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 TCP11Q8WWU5 503 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 TMEM143Q96AN5 459 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 ZNF668Q96K58 619 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 NLRP4Q96MN2 994 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 MTRQ99707 1265 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 GCOM2Q9BZD3 368 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 ATP6V0A4Q9HBG4 840 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 XPNPEP1Q9NQW7 623 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 C1orf112Q9NSG2 853 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 LRWD1Q9UFC0 647 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 DBR1Q9UK59 544 aaKnown RBP8.54□□□□□ -1.04
TRIM59-204ENST00000471396 MTMR6Q9Y217 621 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 COL4A3BPQ9Y5P4 624 aa8.54□□□□□ -1.04
TRIM59-204ENST00000471396 CHD7Q9P2D1 2997 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 A0A087WZ62 844 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 DENND3A2RUS2 1198 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 MGEA5O60502 916 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 USO1O60763 962 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 DGAT1O75907 488 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 UPP2O95045 317 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 HSP90AA1P07900 732 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 FOSL2P15408 326 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 SFPQP23246 707 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 IL17AQ16552 155 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 KRT79Q5XKE5 535 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 ARL6IP4Q66PJ3 421 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 RTN4RL1Q86UN2 441 aaPredicted RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 PIGOQ8TEQ8 1089 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 MYLIPQ8WY64 445 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 ADAM2Q99965 735 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 FDXACB1Q9BRP7 624 aaPredicted RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 PLSCR2Q9NRY7 297 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 ADGRA3Q8IWK6 1321 aa8.53□□□□□ -1.04
TRIM59-204ENST00000471396 COL4A4P53420 1690 aaPredicted RBP8.53□□□□□ -1.04
TRIM59-204ENST00000471396 LINC01553A4QN01 128 aa8.52□□□□□ -1.05
TRIM59-204ENST00000471396 ARHGEF35A5YM69 484 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms