RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 FGF18O76093 207 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 YWHABP31946 246 aaKnown RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 DNM2P50570 870 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 NAALADL2Q58DX5 795 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 RBM23Q86U06 439 aaKnown RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 FAM178BQ8IXR5 827 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 HELQQ8TDG4 1101 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 LPPQ93052 612 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 NAP1L4Q99733 375 aaKnown RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 GCOM2Q9BZD3 368 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 DHX33Q9H6R0 707 aaKnown RBP17.19■□□□□ 0.34
COL1A1-203ENST00000471344 MINDY3Q9H8M7 445 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 IFT122Q9HBG6 1241 aa17.19■□□□□ 0.34
COL1A1-203ENST00000471344 A0A087WWV3 80 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 A0A0U1RQF3 1178 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 GLP2RO95838 553 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 NRIP1P48552 1158 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 POLGP54098 1239 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-203ENST00000471344 ERVFC1P60507 584 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 CALCRLQ16602 461 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 ZNF410Q86VK4 478 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 C4orf19Q8IY42 314 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 THNSL1Q8IYQ7 743 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 PRPF31Q8WWY3 499 aaKnown RBP17.18■□□□□ 0.34
COL1A1-203ENST00000471344 EIF2AK1Q9BQI3 630 aaKnown RBP17.18■□□□□ 0.34
COL1A1-203ENST00000471344 TMEM60Q9H2L4 133 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 PIN4Q9Y237 131 aaKnown RBP17.18■□□□□ 0.34
COL1A1-203ENST00000471344 PCDHB12Q9Y5F1 795 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 COL4A3BPQ9Y5P4 624 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 TRIOO75962 3097 aa17.18■□□□□ 0.34
COL1A1-203ENST00000471344 PER2O15055 1255 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 NEMFO60524 1076 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 SLITRK3O94933 977 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 ADAM15Q13444 863 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 TRIM29Q14134 588 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 EMC2Q15006 297 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 TPH2Q8IWU9 490 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 ZNF710Q8N1W2 664 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 LRRC43Q8N309 656 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 VN1R2Q8NFZ6 395 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-203ENST00000471344 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
COL1A1-203ENST00000471344 POTEMA6NI47 508 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 SRGAP2CP0DJJ0 459 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 LAG3P18627 525 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 SFPQP23246 707 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 TXKP42681 527 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 PHKA2P46019 1235 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 TWF2Q6IBS0 349 aaKnown RBP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 KCNT2Q6UVM3 1135 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 FAM43BQ6ZT52 329 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 CATSPER4Q7RTX7 472 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 ABI1Q8IZP0 508 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 AAASQ9NRG9 546 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 CLEC1BQ9P126 229 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-203ENST00000471344 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
COL1A1-203ENST00000471344 FAM86C2PA6NEL3 165 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 FSCN2O14926 492 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 HOXA2O43364 376 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 MBTPS2O43462 519 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL1A1-203ENST00000471344 MCM7P33993 719 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 RFC5P40937 340 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 NDUFV1P49821 464 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 PLPP4Q5VZY2 271 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 GJD3Q8N144 294 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 EFHBQ8N7U6 833 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 MICAL1Q8TDZ2 1067 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
COL1A1-203ENST00000471344 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 JPH2Q9BR39 696 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-203ENST00000471344 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
COL1A1-203ENST00000471344 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 NCK2O43639 380 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 B4GALT3O60512 393 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 COL9A1P20849 921 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-203ENST00000471344 CDC42EP1Q00587 391 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 UBE3AQ05086 875 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 ZP2Q05996 745 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 PUS10Q3MIT2 529 aaKnown RBP17.14■□□□□ 0.33
COL1A1-203ENST00000471344 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 TMEM173Q86WV6 379 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-203ENST00000471344 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
COL1A1-203ENST00000471344 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms