RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 KLRC1P26715 233 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 ERVFC1P60507 584 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 GIT2Q14161 759 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 SMC1AQ14683 1233 aaKnown RBP10.07□□□□□ -0.8
XRN1-208ENST00000470537 ATAT1Q5SQI0 421 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 CASC1Q6TDU7 716 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 MTHFD1LQ6UB35 978 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 COLGALT1Q8NBJ5 622 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 TMEM117Q9H0C3 514 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 ADAM7Q9H2U9 754 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 SEMA4AQ9H3S1 761 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 KCNH7Q9NS40 1196 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 SPG21Q9NZD8 308 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 ST3GAL5Q9UNP4 418 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
XRN1-208ENST00000470537 COL1A2P08123 1366 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 RIF1Q5UIP0 2472 aaKnown RBP10.06□□□□□ -0.8
XRN1-208ENST00000470537 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 C9IYK1 514 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 BACH1O14867 736 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 FSCN2O14926 492 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 TMOD1P28289 359 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 ID4P47928 161 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 ALDH7A1P49419 539 aaKnown RBP10.06□□□□□ -0.8
XRN1-208ENST00000470537 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
XRN1-208ENST00000470537 ACTR2P61160 394 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 FAM189BP81408 668 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 NUCB1Q02818 461 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 KCNC3Q14003 757 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 ZNF484Q5JVG2 852 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 SYCE2Q6PIF2 218 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 KCNT2Q6UVM3 1135 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 NFXL1Q6ZNB6 911 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 MRPL43Q8N983 215 aaKnown RBP10.06□□□□□ -0.8
XRN1-208ENST00000470537 ACSF2Q96CM8 615 aaPredicted RBP10.06□□□□□ -0.8
XRN1-208ENST00000470537 ZNF558Q96NG5 402 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 MXRA8Q9BRK3 442 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 STK39Q9UEW8 545 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 TCEAL9Q9UHQ7 104 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 SPTBN4Q9H254 2564 aa10.06□□□□□ -0.8
XRN1-208ENST00000470537 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 KMT2EQ8IZD2 1858 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 DOCK5Q9H7D0 1870 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 PRR23AA6NEV1 266 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 E7EWF7 191 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
XRN1-208ENST00000470537 SIAH2O43255 324 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 CYP21A2P08686 494 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 ZNF76P36508 570 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 SLC35G1Q2M3R5 365 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 ASCL5Q7RTU5 278 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 KIAA0319LQ8IZA0 1049 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 ZNF654Q8IZM8 581 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 ZDHHC14Q8IZN3 488 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 LRRC43Q8N309 656 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 TDRD5Q8NAT2 981 aaKnown RBP10.05□□□□□ -0.8
XRN1-208ENST00000470537 IGDCC4Q8TDY8 1250 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 RTP3Q9BQQ7 232 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 MRPL9Q9BYD2 267 aaKnown RBP10.05□□□□□ -0.8
XRN1-208ENST00000470537 DZANK1Q9NVP4 752 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
XRN1-208ENST00000470537 NOC2LQ9Y3T9 749 aaKnown RBP10.05□□□□□ -0.8
XRN1-208ENST00000470537 TELO2Q9Y4R8 837 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
XRN1-208ENST00000470537 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 MAGEB2O15479 319 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 ATG7O95352 703 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 EOMESO95936 686 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 CCNYL3P0C7X3 344 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 MCM5P33992 734 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 GATMP50440 423 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 CDC42EP1Q00587 391 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 NONOQ15233 471 aaKnown RBP eCLIP10.04□□□□□ -0.8
XRN1-208ENST00000470537 MIS18BP1Q6P0N0 1132 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 PPFIBP1Q86W92 1011 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 METTL13Q8N6R0 699 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 VN1R2Q8NFZ6 395 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 TMEM169Q96HH4 297 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 TMEM87BQ96K49 555 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 PCYT2Q99447 389 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 CWH43Q9H720 699 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 DACT1Q9NYF0 836 aa10.04□□□□□ -0.8
XRN1-208ENST00000470537 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms