RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 NUDT11Q96G61 164 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 PPP1R16BQ96T49 567 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 HAPLN2Q9GZV7 340 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 IFT122Q9HBG6 1241 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 CD320Q9NPF0 282 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS8-220ENST00000469713 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
VPS8-220ENST00000469713 CDC42EP3Q9UKI2 254 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 NOB1Q9ULX3 412 aaKnown RBP5.47□□□□□ -1.53
VPS8-220ENST00000469713 CDY2AQ9Y6F7 541 aa5.47□□□□□ -1.53
VPS8-220ENST00000469713 A0A0A6YYK5 440 aaPredicted RBP5.46□□□□□ -1.54
VPS8-220ENST00000469713 A0A0G2JNJ9 132 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 MAFGO15525 162 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 CUTAO60888 179 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 KLHL18O94889 574 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 ZRANB2O95218 330 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS8-220ENST00000469713 CT47B1P0C2W7 299 aaPredicted RBP5.46□□□□□ -1.54
VPS8-220ENST00000469713 PF4V1P10720 104 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 KCNQ1P51787 676 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 SPIDRQ14159 915 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 WDR75Q8IWA0 830 aaKnown RBP5.46□□□□□ -1.54
VPS8-220ENST00000469713 RSAD2Q8WXG1 361 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 DYDC2Q96IM9 177 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 HIST1H2AHQ96KK5 128 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 CAMKK2Q96RR4 588 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 SLC38A3Q99624 504 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 HIST1H2AJQ99878 128 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 SOX7Q9BT81 388 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 L2HGDHQ9H9P8 463 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 TCF7L1Q9HCS4 588 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 Q9UFV3 132 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 DNAI1Q9UI46 699 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 TUBD1Q9UJT1 453 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 FBXO10Q9UK96 956 aa5.46□□□□□ -1.54
VPS8-220ENST00000469713 RFXAPO00287 272 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 FFAR3O14843 346 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 PRPF3O43395 683 aaKnown RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 GPR15P49685 360 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 STAT5BP51692 787 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 SLC5A3P53794 718 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 LINC00310P59036 64 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 TOP3AQ13472 1001 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 MBNL2Q5VZF2 373 aaKnown RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 TPH2Q8IWU9 490 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 PPM1NQ8N819 430 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 SSH1Q8WYL5 1049 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 DACT3Q96B18 629 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 YTHDC1Q96MU7 727 aaKnown RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 FDXACB1Q9BRP7 624 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 ACE2Q9BYF1 805 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 POLR3BQ9NW08 1133 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 NTMQ9P121 344 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 SAE1Q9UBE0 346 aaPredicted RBP5.45□□□□□ -1.54
VPS8-220ENST00000469713 GIT1Q9Y2X7 761 aa5.45□□□□□ -1.54
VPS8-220ENST00000469713 SH3D21A4FU49 640 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 NPIPB6E9PJ23 425 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 NDUFS2O75306 463 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 RFPL1O75677 317 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 SEC24DO94855 1032 aaPredicted RBP5.44□□□□□ -1.54
VPS8-220ENST00000469713 IL33O95760 270 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 TSPAN15O95858 294 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 XPAP23025 273 aaPredicted RBP5.44□□□□□ -1.54
VPS8-220ENST00000469713 POLD1P28340 1107 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 EIF4HQ15056 248 aaKnown RBP5.44□□□□□ -1.54
VPS8-220ENST00000469713 KCNA10Q16322 511 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 ZNF385BQ569K4 471 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 POU5F2Q8N7G0 328 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 HSPBAP1Q96EW2 488 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 SYNPO2Q9UMS6 1093 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 ANKRD6Q9Y2G4 727 aa5.44□□□□□ -1.54
VPS8-220ENST00000469713 NRP2O60462 931 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 HMGCRP04035 888 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS8-220ENST00000469713 ETV4P43268 484 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 SARSP49591 514 aaKnown RBP5.43□□□□□ -1.54
VPS8-220ENST00000469713 AFF3P51826 1226 aaKnown RBP5.43□□□□□ -1.54
VPS8-220ENST00000469713 CAP1Q01518 475 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 KIF23Q02241 960 aaPredicted RBP5.43□□□□□ -1.54
VPS8-220ENST00000469713 MGAT5Q09328 741 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 TCIRG1Q13488 830 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 ADRM1Q16186 407 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 VMACQ2NL98 169 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 CCDC178Q5BJE1 867 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 MCTP2Q6DN12 878 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 Q6ZUG5 572 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 LARP4Q71RC2 724 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS8-220ENST00000469713 GLB1L2Q8IW92 636 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 IFNL2Q8IZJ0 200 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 CARFQ8N187 725 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 MYO1HQ8N1T3 1032 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 NKD2Q969F2 451 aaPredicted RBP5.43□□□□□ -1.54
VPS8-220ENST00000469713 WDR92Q96MX6 357 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
VPS8-220ENST00000469713 CYP1A1P04798 512 aaPredicted RBP5.42□□□□□ -1.54
VPS8-220ENST00000469713 RAP1GAPP47736 663 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms