RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IFFO1Q0D2I5 559 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 Q3C1V9 767 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CCDC178Q5BJE1 867 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CEP85LQ5SZL2 805 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 AGBL2Q5U5Z8 902 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 GPR142Q7Z601 462 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 PLEKHH3Q7Z736 793 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 KIAA0895Q8NCT3 520 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 MS4A14Q96JA4 679 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 PSMB7Q99436 277 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 PORCNQ9H237 461 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 FAM207AQ9NSI2 230 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SLC12A6Q9UHW9 1150 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SUFUQ9UMX1 484 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 PLAAQ9Y263 795 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 PARP14Q460N5 1801 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CLGNO14967 610 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SERPING1P05155 500 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 HOXC6P09630 235 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 OR52Z1P0C646 297 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 MYZAPP0CAP1 466 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 GHRP10912 638 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 FCER1AP12319 257 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SLC1A4P43007 532 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 MRPL12P52815 198 aaKnown RBP10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CCNA1P78396 465 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 GFPT1Q06210 699 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-205ENST00000469550 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SNCBQ16143 134 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SBK1Q52WX2 424 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CATSPERGQ6ZRH7 1159 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 USP38Q8NB14 1042 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 SGSM3Q96HU1 749 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 NFS1Q9Y697 457 aa10.45□□□□□ -0.74
HDAC3-205ENST00000469550 MYH10P35580 1976 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CYP2D7A0A087X1C5 515 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 USP17L12C9JPN9 530 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 USP17L21D6R901 530 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 PEX10O60683 326 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 PALMO75781 387 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 IGHA2P01877 340 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 GUCY2FP51841 1108 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CACNB2Q08289 660 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-205ENST00000469550 ABCB5Q2M3G0 1257 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CERKLQ49MI3 558 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-205ENST00000469550 RCSD1Q6JBY9 416 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 UNC13DQ70J99 1090 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CACNA2D4Q7Z3S7 1137 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CALR3Q96L12 384 aaKnown RBP10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CCDC114Q96M63 670 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 KRT12Q99456 494 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 RIC8AQ9NPQ8 531 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 CEP72Q9P209 647 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 DDX20Q9UHI6 824 aaKnown RBP10.44□□□□□ -0.74
HDAC3-205ENST00000469550 PFASO15067 1338 aa10.44□□□□□ -0.74
HDAC3-205ENST00000469550 ESYT3A0FGR9 886 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ZSCAN5CA6NGD5 496 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SLC15A5A6NIM6 579 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 NKRFO15226 690 aaKnown RBP eCLIP10.43□□□□□ -0.74
HDAC3-205ENST00000469550 BUB1O43683 1085 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 VCAM1P19320 739 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 HSD17B3P37058 310 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 PSMD2Q13200 908 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 XRCC4Q13426 336 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 GRM4Q14833 912 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 INF2Q27J81 1249 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 C10orf76Q5T2E6 689 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 LHX8Q68G74 356 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 CYB5D1Q6P9G0 228 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 LRRC55Q6ZSA7 311 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 MAATS1Q7Z4T9 603 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SCFD2Q8WU76 684 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 EEF2KMTQ96G04 330 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 PBKQ96KB5 322 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 PLIN2Q99541 437 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ATP8A2Q9NTI2 1148 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 STK17AQ9UEE5 414 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 RAD51CO43502 376 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ECHS1P30084 290 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SLC8A1P32418 973 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 KCNMA1Q12791 1236 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 GRB14Q14449 540 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SLC18A3Q16572 532 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ANKRD20A8PQ5CZ79 823 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SFMBT2Q5VUG0 894 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 KRT25Q7Z3Z0 450 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ACTRT1Q8TDG2 376 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 CALML4Q96GE6 196 aa10.43□□□□□ -0.74
HDAC3-205ENST00000469550 OSBPL7Q9BZF2 842 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms