RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 BMP3P12645 472 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 DRAP1Q14919 205 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 ARFGAP2Q8N6H7 521 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 DYDC2Q96IM9 177 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 STK33Q9BYT3 514 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 F8VZ95 297 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 ZBTB39O15060 712 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CHMP2AO43633 222 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 BUB1BO60566 1050 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CYP3A4P08684 503 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 LMNB1P20700 586 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 ECE1P42892 770 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 FMO5P49326 533 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 ZNF844Q08AG5 666 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 COG2Q14746 738 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 DLGAP5Q15398 846 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 NLRP14Q86W24 1093 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 SLC35G2Q8TBE7 412 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CCT8L2Q96SF2 557 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 GMLQ99445 158 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CELF4Q9BZC1 486 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 BCCIPQ9P287 314 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 ZNF70Q9UC06 446 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 CEP83Q9Y592 693 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 SLITRK3O94933 977 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 ABCB4P21439 1286 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 PSMD1Q99460 953 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 IGLV3-22A0A075B6J6 115 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 FAM170AA1A519 330 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 E7EVH7 732 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 FGGP02679 453 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 PPARDQ03181 441 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 OTUD6BQ8N6M0 293 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 KAT2BQ92831 832 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 DPH5Q9H2P9 285 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 CXorf56Q9H5V9 222 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 TUFT1Q9NNX1 390 aa17.13■□□□□ 0.33
TSPAN4-211ENST00000468468 MEFVO15553 781 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 CYP2J2P51589 502 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 RUFY4Q6ZNE9 571 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 OTOP1Q7RTM1 612 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 RFFLQ8WZ73 363 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 PPANQ9NQ55 473 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 PPP1R9AQ9ULJ8 1098 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 UTP11Q9Y3A2 253 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 MYO1FO00160 1098 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 TMEM253P0C7T8 217 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 BAG6P46379 1132 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 CBWD6Q4V339 395 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 CBWD3Q5JTY5 395 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 CBWD5Q5RIA9 395 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 LRCH2Q5VUJ6 765 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 KCTD17Q8N5Z5 321 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 MKNK1Q9BUB5 465 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 ATXN2Q99700 1313 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-211ENST00000468468 BIRC3Q13489 604 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 NFIL3Q16649 462 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 NCANO14594 1321 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 IGSF9BQ9UPX0 1349 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 TRIM49P0CI25 452 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 TRIM49CP0CI26 452 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 PPATQ06203 517 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 HS2ST1Q7LGA3 356 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 TMC3Q7Z5M5 1100 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 PAGR1Q9BTK6 254 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 DDX3YO15523 660 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 FAM107AO95990 144 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 CFBP00751 764 aa17.11■□□□□ 0.33
TSPAN4-211ENST00000468468 TNFAIP3P21580 790 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms