RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 IFT22Q9H7X7 185 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 DNAI1Q9UI46 699 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 ZFR2Q9UPR6 939 aaKnown RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 TCAF1Q9Y4C2 921 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 A0A0A6YYJ9 748 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 LCHNA4D1U4 455 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 SLC26A4O43511 780 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 ZNF623O75123 536 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 RPS19P39019 145 aaKnown RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 ANTXR2P58335 489 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 STRN3Q13033 797 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 DUSP8Q13202 625 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 ZNF585AQ6P3V2 769 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 DDX46Q7L014 1031 aaKnown RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 CXorf67Q86X51 503 aaPredicted RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 FUKQ8N0W3 1084 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 NKD2Q969F2 451 aaPredicted RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 HIST1H2AHQ96KK5 128 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 HIST1H2AJQ99878 128 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 NOL10Q9BSC4 688 aaKnown RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 C1QTNF3Q9BXJ4 246 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 DEF6Q9H4E7 631 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 SYNPO2Q9UMS6 1093 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 RBM8AQ9Y5S9 174 aaKnown RBP5.27□□□□□ -1.57
VPS50-209ENST00000467326 SLC30A1Q9Y6M5 507 aa5.27□□□□□ -1.57
VPS50-209ENST00000467326 ELL2O00472 640 aaPredicted RBP5.26□□□□□ -1.57
VPS50-209ENST00000467326 NEMP1O14524 444 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 RAB11FIP3O75154 756 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 PCDH8O95206 1070 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 COMTP21964 271 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 MASP1P48740 699 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 TCIRG1Q13488 830 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 HS1BP3Q53T59 392 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 BROXQ5VW32 411 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 HDGFL2Q7Z4V5 671 aaPredicted RBP5.26□□□□□ -1.57
VPS50-209ENST00000467326 PALM2Q8IXS6 379 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 CDYL2Q8N8U2 506 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 SHCBP1Q8NEM2 672 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 Q8TCH9 128 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 ZNF496Q96IT1 587 aaPredicted RBP5.26□□□□□ -1.57
VPS50-209ENST00000467326 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 KLC2Q9H0B6 622 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 PCDHB6Q9Y5E3 794 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 PPP2R3BQ9Y5P8 575 aa5.26□□□□□ -1.57
VPS50-209ENST00000467326 MUSKO15146 869 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 ZEB2O60315 1214 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 TNFRSF1AP19438 455 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 CNGA1P29973 690 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 BPIFB4P59827 614 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 ATP2C1P98194 919 aaPredicted RBP5.25□□□□□ -1.57
VPS50-209ENST00000467326 RIN1Q13671 783 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 FRMD7Q6ZUT3 714 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 POLNQ7Z5Q5 900 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 STRA8Q7Z7C7 330 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 CLEC14AQ86T13 490 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 GPR135Q8IZ08 494 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 AFAP1L2Q8N4X5 818 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 CDK5RAP1Q96SZ6 601 aaKnown RBP5.25□□□□□ -1.57
VPS50-209ENST00000467326 SLC6A15Q9H2J7 730 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 C14orf93Q9H972 538 aaKnown RBP5.25□□□□□ -1.57
VPS50-209ENST00000467326 PRKAB1Q9Y478 270 aa5.25□□□□□ -1.57
VPS50-209ENST00000467326 MYPNQ86TC9 1320 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 PMS2P1A4D2B8 440 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 C2orf78A6NCI8 922 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 OVOL3O00110 214 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 ULK1O75385 1050 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 PFKMP08237 780 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
VPS50-209ENST00000467326 HNRNPLP14866 589 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS50-209ENST00000467326 ID4P47928 161 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 MANFP55145 182 aaKnown RBP5.24□□□□□ -1.57
VPS50-209ENST00000467326 PPARAQ07869 468 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 SAFB2Q14151 953 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS50-209ENST00000467326 EGFLAMQ63HQ2 1017 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 ANKRD53Q8N9V6 530 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 RABGGTAQ92696 567 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 SORCS2Q96PQ0 1159 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 CHMP4AQ9BY43 222 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 TSC22D4Q9Y3Q8 395 aa5.24□□□□□ -1.57
VPS50-209ENST00000467326 NOC2LQ9Y3T9 749 aaKnown RBP5.24□□□□□ -1.57
VPS50-209ENST00000467326 A0A1W2PRX2 142 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 BRINP1O60477 761 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 TOX4O94842 621 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 CLEC2LP0C7M8 214 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 MSX2P35548 267 aaPredicted RBP5.23□□□□□ -1.57
VPS50-209ENST00000467326 ADCY7P51828 1080 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 HMGA2P52926 109 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 SESN3P58005 492 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 R3HDM1Q15032 1099 aaKnown RBP5.23□□□□□ -1.57
VPS50-209ENST00000467326 CDSNQ15517 529 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 MAN2A1Q16706 1144 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 GAGE13Q4V321 117 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 KRT40Q6A162 431 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 CCDC62Q6P9F0 684 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 RASSF3Q86WH2 238 aa5.23□□□□□ -1.57
VPS50-209ENST00000467326 PLA2G15Q8NCC3 412 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms