RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CIDEBQ9UHD4 219 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CROTQ9UKG9 612 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 LRRC42Q9Y546 428 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 RGPD5Q99666 1765 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CCDC194A0A1B0GVG4 234 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 HIP1RO75146 1068 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 FGGP02679 453 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 BCRP11274 1271 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 TECP42680 631 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 DENND2CQ68D51 928 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 SESTD1Q86VW0 696 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 CLIP3Q96DZ5 547 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ETNK1Q9HBU6 452 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 FAM114A2Q9NRY5 505 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 TMED5Q9Y3A6 229 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 COL16A1Q07092 1604 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ATP9BO43861 1147 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 FLOT1O75955 427 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 UQCRFS1P1P0C7P4 283 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 VDRP11473 427 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ACTN1P12814 892 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 FGFR4P22455 802 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ZNF571Q7Z3V5 609 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-204ENST00000466982 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 TMEM237Q96Q45 408 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 LBHD1Q9BQE6 289 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-204ENST00000466982 DLGAP2Q9P1A6 1054 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
SFXN3-204ENST00000466982 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.51
SFXN3-204ENST00000466982 CCDC169A6NNP5 214 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 CCDC188H7C350 402 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 SUN1O94901 812 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 NUDT17P0C025 328 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 SP100P23497 879 aaPredicted RBP11.9□□□□□ -0.51
SFXN3-204ENST00000466982 BCAMP50895 628 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 EVA1CP58658 441 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 USP46P62068 366 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 KLRC3Q07444 240 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 NSUN2Q08J23 767 aaKnown RBP eCLIP11.9□□□□□ -0.51
SFXN3-204ENST00000466982 SEPT2Q15019 361 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 GDAP1Q8TB36 358 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 TBC1D16Q8TBP0 767 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 IFT43Q96FT9 208 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 NSRP1Q9H0G5 558 aaKnown RBP11.9□□□□□ -0.51
SFXN3-204ENST00000466982 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 CCDC134Q9H6E4 229 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 TCP11L1Q9NUJ3 509 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 LRP2BPQ9P2M1 347 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 PCDHA6Q9UN73 950 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 MTMR7Q9Y216 660 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 SH3GLB1Q9Y371 365 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 PCDHA8Q9Y5H6 950 aa11.9□□□□□ -0.51
SFXN3-204ENST00000466982 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 TMEM247A6NEH6 219 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 CES2O00748 559 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 P4HA2O15460 535 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 TPPPO94811 219 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 GH1P01241 217 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 CYP7A1P22680 504 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 PACS1Q6VY07 963 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 SUPT20HQ8NEM7 779 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 DDX25Q9UHL0 483 aaKnown RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 PCDHA4Q9UN74 947 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 PEX11AO75192 247 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 SUPT3HO75486 399 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 GNAT2P19087 354 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 ASIC2Q16515 512 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 ZDHHC24Q6UX98 284 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-204ENST00000466982 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 VCX3AQ9NNX9 186 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 BTG4Q9NY30 223 aa11.89□□□□□ -0.51
SFXN3-204ENST00000466982 TRAF5O00463 557 aa11.88□□□□□ -0.51
SFXN3-204ENST00000466982 TPBGLP0DKB5 382 aa11.88□□□□□ -0.51
SFXN3-204ENST00000466982 CALB2P22676 271 aa11.88□□□□□ -0.51
SFXN3-204ENST00000466982 DYNLL1P63167 89 aaKnown RBP11.88□□□□□ -0.51
SFXN3-204ENST00000466982 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
SFXN3-204ENST00000466982 AUHQ13825 339 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms