RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PHIPQ8WWQ0 1821 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 PTPRFP10586 1907 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 APAF1O14727 1248 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 B4GALT4O60513 344 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 FLOT1O75955 427 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 CIAO1O76071 339 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 NBPF7P0C2Y1 421 aaPredicted RBP7.1□□□□□ -1.27
NCL-208ENST00000466274 NKX3-2P78367 333 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 RASGRF1Q13972 1273 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 ENOX2Q16206 610 aaKnown RBP7.1□□□□□ -1.27
NCL-208ENST00000466274 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 MAMDC4Q6UXC1 1216 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 MAPKAPK5Q8IW41 473 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 C3orf58Q8NDZ4 430 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 ACER1Q8TDN7 264 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 SH3RF3Q8TEJ3 882 aaPredicted RBP7.1□□□□□ -1.27
NCL-208ENST00000466274 TGFBRAP1Q8WUH2 860 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 FAM168AQ92567 244 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 TSR2Q969E8 191 aaKnown RBP7.1□□□□□ -1.27
NCL-208ENST00000466274 NSUN4Q96CB9 384 aaKnown RBP7.1□□□□□ -1.27
NCL-208ENST00000466274 DDX11Q96FC9 970 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 AP5M1Q9H0R1 490 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 PRDM7Q9NQW5 492 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 CACNA2D2Q9NY47 1150 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 FRMPD3Q5JV73 1810 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 DOCK2Q92608 1830 aa7.1□□□□□ -1.27
NCL-208ENST00000466274 MYO9BQ13459 2157 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 FLT1P17948 1338 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 CHD8Q9HCK8 2581 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 TREHO43280 583 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 EFCAB14O75071 495 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 PAGE1O75459 146 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 SNAI1O95863 264 aaPredicted RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 BMP6P22004 513 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 STAT3P40763 770 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 BFSP2Q13515 415 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 MVPQ14764 893 aaKnown RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 ACAP1Q15027 740 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 ST3GAL2Q16842 350 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 CCDC27Q2M243 656 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 SHROOM1Q2M3G4 852 aaPredicted RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 CCDC144BQ3MJ40 725 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 TATDN1Q6P1N9 297 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 RIOX2Q8IUF8 465 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 MAGEB6Q8N7X4 407 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 SAMD11Q96NU1 681 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 ALDH8A1Q9H2A2 487 aaPredicted RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
NCL-208ENST00000466274 SH2D4AQ9H788 454 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 CLDND1Q9NY35 253 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 LRP2BPQ9P2M1 347 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 SERPINB13Q9UIV8 391 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 PALD1Q9ULE6 856 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 REV3LO60673 3130 aa7.09□□□□□ -1.27
NCL-208ENST00000466274 TRANK1O15050 2925 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 PKD1L2Q7Z442 2459 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 A0A0G2JMZ2 1700 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 IGSF3O75054 1194 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 FBXO24O75426 580 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 PARNO95453 639 aaKnown RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 MAPK1P28482 360 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 NTF4P34130 210 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 IL15P40933 162 aaPredicted RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 VCPP55072 806 aaKnown RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 TNFAIP2Q03169 654 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 SMAD4Q13485 552 aaKnown RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 TMEM132BQ14DG7 1078 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 FSCN1Q16658 493 aaKnown RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
NCL-208ENST00000466274 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 CERS3Q8IU89 383 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 RMDN1Q96DB5 314 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 VWCEQ96DN2 955 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 ATG4CQ96DT6 458 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
NCL-208ENST00000466274 AATFQ9NY61 560 aaKnown RBP eCLIP7.08□□□□□ -1.283e-83■■■■■ 35
NCL-208ENST00000466274 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 ZNF236Q9UL36 1845 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 LCHNA4D1U4 455 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 LINC01553A4QN01 128 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 ENC1O14682 589 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 MBTPS2O43462 519 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 GJB5O95377 273 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 IQCF3P0C7M6 154 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 MCAMP43121 646 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 WDR5P61964 334 aaKnown RBP7.07□□□□□ -1.28
NCL-208ENST00000466274 BEX3Q00994 111 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 PDE4CQ08493 712 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 NAA16Q6N069 864 aaPredicted RBP7.07□□□□□ -1.28
NCL-208ENST00000466274 ATG9AQ7Z3C6 839 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 TLK2Q86UE8 772 aa7.07□□□□□ -1.28
NCL-208ENST00000466274 ALG13Q9NP73 1137 aaKnown RBP7.07□□□□□ -1.28
NCL-208ENST00000466274 SAP30BPQ9UHR5 308 aaKnown RBP7.07□□□□□ -1.28
NCL-208ENST00000466274 Q9Y3F1 56 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms