RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 CDC25AP30304 524 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 ARL2P36404 184 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
RBBP4-209ENST00000465780 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 NFX1Q12986 1120 aaKnown RBP11.84□□□□□ -0.51
RBBP4-209ENST00000465780 TFDP1Q14186 410 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 PCBP1Q15365 356 aaKnown RBP eCLIP11.84□□□□□ -0.51
RBBP4-209ENST00000465780 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 CABP7Q86V35 215 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 MYOCDQ8IZQ8 938 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
RBBP4-209ENST00000465780 TMX1Q9H3N1 280 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 C1orf112Q9NSG2 853 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 SRPRBQ9Y5M8 271 aaKnown RBP11.84□□□□□ -0.51
RBBP4-209ENST00000465780 MYH11P35749 1972 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
RBBP4-209ENST00000465780 TRANK1O15050 2925 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 TLL1O43897 1013 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 USO1O60763 962 aaKnown RBP11.83□□□□□ -0.52
RBBP4-209ENST00000465780 YEATS4O95619 227 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 STAG3L1P0CL83 205 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 PBX2P40425 430 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 UBA7P41226 1012 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 RABGGTBP53611 331 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 DSC3Q14574 896 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 TMEM119Q4V9L6 283 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 RTN4RL1Q86UN2 441 aaPredicted RBP11.83□□□□□ -0.52
RBBP4-209ENST00000465780 NPAS4Q8IUM7 802 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 LINC01599Q8WXQ3 324 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 NLRP4Q96MN2 994 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 ZBED2Q9BTP6 218 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 NFKBIZQ9BYH8 718 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 CCSER1Q9C0I3 900 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 SEMA6BQ9H3T3 888 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 SLC28A3Q9HAS3 691 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 IFT122Q9HBG6 1241 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 RGS18Q9NS28 235 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 FBXO2Q9UK22 296 aaPredicted RBP11.83□□□□□ -0.52
RBBP4-209ENST00000465780 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.52
RBBP4-209ENST00000465780 INSL6Q9Y581 213 aa11.83□□□□□ -0.52
RBBP4-209ENST00000465780 TCHHQ07283 1943 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 A0A087WWV3 80 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 DENND3A2RUS2 1198 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 PPP6R2O75170 966 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 BRD1O95696 1058 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 ZSCAN20P17040 1043 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 PHKA2P46019 1235 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 SARSP49591 514 aaKnown RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 PTENP60484 403 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 GRB10Q13322 594 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 SLC24A5Q71RS6 500 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 KSR1Q8IVT5 923 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 KRI1Q8N9T8 703 aaKnown RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 LINC00301Q8NCQ3 95 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 KIFAP3Q92845 792 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 ZNF668Q96K58 619 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 ADAM2Q99965 735 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 NKX2-4Q9H2Z4 354 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 ZNF576Q9H609 170 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 KCND2Q9NZV8 630 aa11.82□□□□□ -0.52
RBBP4-209ENST00000465780 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-209ENST00000465780 C9IYK1 514 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 E9PMD0 336 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 MGEA5O60502 916 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 CA3P07451 260 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 MYOGP15173 224 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 GLRA2P23416 452 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 TXLNAP40222 546 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 FAM189BP81408 668 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 CEBPZQ03701 1054 aaKnown RBP11.81□□□□□ -0.52
RBBP4-209ENST00000465780 GRIN1Q05586 938 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 PKP1Q13835 747 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 CAPSQ13938 189 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 STK38Q15208 465 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 FAM102BQ5T8I3 360 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 PPP2R2DQ66LE6 453 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 RINT1Q6NUQ1 792 aa11.81□□□□□ -0.52
RBBP4-209ENST00000465780 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms