RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 PCDHA12Q9UN75 941 aa22.53■■□□□ 1.2
COL2A1-203ENST00000465743 SMC3Q9UQE7 1217 aa22.53■■□□□ 1.2
COL2A1-203ENST00000465743 K7ELQ4 463 aaPredicted RBP22.52■■□□□ 1.2
COL2A1-203ENST00000465743 SLITRK3O94933 977 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 GTF2F1P35269 517 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL2A1-203ENST00000465743 IRS1P35568 1242 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 CUL4AQ13619 759 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 XKR9Q5GH70 373 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 CLLU1OSQ5K130 101 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 SPOUT1Q5T280 376 aaKnown RBP22.52■■□□□ 1.2
COL2A1-203ENST00000465743 SLC7A3Q8WY07 619 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 ZSWIM4Q9H7M6 989 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 TYW1Q9NV66 732 aaKnown RBP22.52■■□□□ 1.2
COL2A1-203ENST00000465743 COL4A3BPQ9Y5P4 624 aa22.52■■□□□ 1.2
COL2A1-203ENST00000465743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 H3BQ06 376 aaPredicted RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 TNFRSF10AO00220 468 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 DKC1O60832 514 aaKnown RBP eCLIP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 ZSCAN20P17040 1043 aaPredicted RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 PBX3P40426 434 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 LONRF3Q496Y0 759 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 EP400NLQ6ZTU2 488 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 ADGRD2Q7Z7M1 963 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 ZNF410Q86VK4 478 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 ZNF710Q8N1W2 664 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 FBXO18Q8NFZ0 1043 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 SPPL3Q8TCT6 385 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 PRPF31Q8WWY3 499 aaKnown RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 CASD1Q96PB1 797 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 CWH43Q9H720 699 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 ELAC1Q9H777 363 aaKnown RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 MINDY3Q9H8M7 445 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 IFT122Q9HBG6 1241 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 XPNPEP1Q9NQW7 623 aa22.51■■□□□ 1.19
COL2A1-203ENST00000465743 PIN4Q9Y237 131 aaKnown RBP22.51■■□□□ 1.19
COL2A1-203ENST00000465743 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
COL2A1-203ENST00000465743 GJB2P29033 226 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 RFC5P40937 340 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 HYAL1Q12794 435 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 ZNF174Q15697 407 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 LRRC55Q6ZSA7 311 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 ZNF598Q86UK7 904 aaKnown RBP22.5■■□□□ 1.19
COL2A1-203ENST00000465743 HSCBQ8IWL3 235 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 COLGALT1Q8NBJ5 622 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 P2RX5Q93086 422 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 HSD17B14Q9BPX1 270 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 JPH2Q9BR39 696 aaPredicted RBP22.5■■□□□ 1.19
COL2A1-203ENST00000465743 LMAN2LQ9H0V9 348 aa22.5■■□□□ 1.19
COL2A1-203ENST00000465743 FOXP1Q9H334 677 aaPredicted RBP22.5■■□□□ 1.19
COL2A1-203ENST00000465743 SRGAP2CP0DJJ0 459 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 LAMTOR4Q0VGL1 99 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 CATSPER4Q7RTX7 472 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 HELQQ8TDG4 1101 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 PIGOQ8TEQ8 1089 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 POF1BQ8WVV4 589 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 PSPC1Q8WXF1 523 aaKnown RBP22.49■■□□□ 1.19
COL2A1-203ENST00000465743 LPPQ93052 612 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 TMEM117Q9H0C3 514 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 CLDND1Q9NY35 253 aa22.49■■□□□ 1.19
COL2A1-203ENST00000465743 MEIS3P2A8K0S8 358 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 LINC01565O15544 149 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 COL19A1Q14993 1142 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 TTC38Q5R3I4 469 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 TWF2Q6IBS0 349 aaKnown RBP22.48■■□□□ 1.19
COL2A1-203ENST00000465743 OTUD6AQ7L8S5 288 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 NOSTRINQ8IVI9 506 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.48■■□□□ 1.19
COL2A1-203ENST00000465743 PABPC5Q96DU9 382 aaKnown RBP22.48■■□□□ 1.19
COL2A1-203ENST00000465743 IGFLR1Q9H665 355 aa22.48■■□□□ 1.19
COL2A1-203ENST00000465743 A0A0U1RQF3 1178 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 MED24O75448 989 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 LYPLA2O95372 231 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 OR52Z1P0C646 297 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 SPATA31C1P0DKV0 1188 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 IL9P15248 144 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 PHKA2P46019 1235 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 DLX2Q07687 328 aaPredicted RBP22.47■■□□□ 1.19
COL2A1-203ENST00000465743 GNL2Q13823 731 aaKnown RBP22.47■■□□□ 1.19
COL2A1-203ENST00000465743 CLUL1Q15846 466 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 LEXMQ3ZCV2 418 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 LRRC43Q8N309 656 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 ASAP3Q8TDY4 903 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 INTS4Q96HW7 963 aaKnown RBP22.47■■□□□ 1.19
COL2A1-203ENST00000465743 MTRQ99707 1265 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 PPME1Q9Y570 386 aa22.47■■□□□ 1.19
COL2A1-203ENST00000465743 FGF18O76093 207 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 LTBRP36941 435 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 TECP42680 631 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 CDC42EP1Q00587 391 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 FAM43BQ6ZT52 329 aaPredicted RBP22.46■■□□□ 1.19
COL2A1-203ENST00000465743 FERMT3Q86UX7 667 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 THNSL1Q8IYQ7 743 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 ABI1Q8IZP0 508 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 RNF149Q8NC42 400 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 NEK9Q8TD19 979 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 AGPAT5Q9NUQ2 364 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 RNF216Q9NWF9 866 aaPredicted RBP22.46■■□□□ 1.19
COL2A1-203ENST00000465743 DACT1Q9NYF0 836 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 PCDHB12Q9Y5F1 795 aa22.46■■□□□ 1.19
COL2A1-203ENST00000465743 H3BQV1 296 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms